RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 FAM46DQ8NEK8 389 aa12.44□□□□□ -0.42
TRAPPC9-206ENST00000519482 NAF1Q96HR8 494 aaKnown RBP12.44□□□□□ -0.42
TRAPPC9-206ENST00000519482 BTBD6Q96KE9 485 aa12.44□□□□□ -0.42
TRAPPC9-206ENST00000519482 MCCC1Q96RQ3 725 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC9-206ENST00000519482 LGR4Q9BXB1 951 aa12.44□□□□□ -0.42
TRAPPC9-206ENST00000519482 TEX101Q9BY14 249 aa12.44□□□□□ -0.42
TRAPPC9-206ENST00000519482 SYNDIG1Q9H7V2 258 aa12.44□□□□□ -0.42
TRAPPC9-206ENST00000519482 VIPAS39Q9H9C1 493 aa12.44□□□□□ -0.42
TRAPPC9-206ENST00000519482 CYP4F12Q9HCS2 524 aa12.44□□□□□ -0.42
TRAPPC9-206ENST00000519482 MRPL40Q9NQ50 206 aaKnown RBP12.44□□□□□ -0.42
TRAPPC9-206ENST00000519482 PHPT1Q9NRX4 125 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC9-206ENST00000519482 RABGEF1Q9UJ41 708 aa12.44□□□□□ -0.42
TRAPPC9-206ENST00000519482 SSUH2Q9Y2M2 353 aa12.44□□□□□ -0.42
TRAPPC9-206ENST00000519482 PPIL1Q9Y3C6 166 aa12.44□□□□□ -0.42
TRAPPC9-206ENST00000519482 KALRNO60229 2985 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 A0A1W2PQM1 296 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 PRSS38A1L453 326 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 CASC3O15234 703 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 DDX3YO15523 660 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 KLK10O43240 276 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 NOBOXO60393 691 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 PGLSO95336 258 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 RPLP0P05388 317 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 ITGA2BP08514 1039 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 KRT10P13645 584 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 CES1P23141 567 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 CTNNA2P26232 953 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 CCKBRP32239 447 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 MAXP61244 160 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 VSNL1P62760 191 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 CCL7P80098 99 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 ARHGEF7Q14155 803 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 PAFAH1B3Q15102 231 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 C14orf28Q4W4Y0 310 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 ARMC12Q5T9G4 340 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 USP45Q70EL2 814 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 PELI3Q8N2H9 469 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 ZNF564Q8TBZ8 553 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 SLC39A7Q92504 469 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 DTD2Q96FN9 168 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 MS4A14Q96JA4 679 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 TMEM74Q96NL1 305 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 LRRC1Q9BTT6 524 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 FUT8Q9BYC5 575 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 STRADBQ9C0K7 418 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 POLR1EQ9GZS1 481 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 TMEM168Q9H0V1 697 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 LRRN3Q9H3W5 708 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 DPEP2Q9H4A9 486 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 HAUS2Q9NVX0 235 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 AMACRQ9UHK6 382 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 MOSPD1Q9UJG1 213 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 PCDHA3Q9Y5H8 950 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 MGAQ8IWI9 3026 aa12.43□□□□□ -0.42
TRAPPC9-206ENST00000519482 GOLGA6L10A0A0M3HER8 536 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 NPIPB15A6NHN6 443 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 ERVH48-1M5A8F1 160 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 PLD2O14939 933 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 NUDT21O43809 227 aaKnown RBP12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 FZD6O60353 706 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 TNFSF15O95150 251 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 CEACAM5P06731 702 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 CCNB1P14635 433 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 LHCGRP22888 699 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 ETV3P41162 512 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 GARSP41250 739 aaKnown RBP12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 SSR1P43307 286 aaKnown RBP12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 ARSEP51690 589 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 INHBCP55103 352 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 RHDQ02161 417 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 DPTQ07507 201 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 C2orf54Q08AI8 447 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 GALNT2Q10471 571 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 MMRN1Q13201 1228 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 PEX6Q13608 980 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 DPYSL3Q14195 570 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 HLTFQ14527 1009 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 PDK2Q15119 407 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 DENND2CQ68D51 928 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 ALG1LQ6GMV1 187 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 TIGD7Q6NT04 549 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 C8orf74Q6P047 294 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 FOXR1Q6PIV2 292 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 RAB11FIP2Q7L804 512 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 HSD11B1LQ7Z5J1 315 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 HEATR4Q86WZ0 1026 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 CCNJLQ8IV13 435 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 MAP7D3Q8IWC1 876 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 GPBAR1Q8TDU6 330 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 SNRNP27Q8WVK2 155 aaKnown RBP12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 PIH1D2Q8WWB5 315 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 MAIP1Q8WWC4 291 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 FATE1Q969F0 183 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 PKNOX2Q96KN3 472 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 RUNDC3BQ96NL0 473 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 SEMA3CQ99985 751 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 ZNF670Q9BS34 389 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 GSDMCQ9BYG8 508 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 FRMD8Q9BZ67 464 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 CARS2Q9HA77 564 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms