RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 CAPN11Q9UMQ6 739 aa10.82□□□□□ -0.68
PVT1-208ENST00000519481 RPL26L1Q9UNX3 145 aaKnown RBP10.82□□□□□ -0.68
PVT1-208ENST00000519481 CHKBQ9Y259 395 aa10.82□□□□□ -0.68
PVT1-208ENST00000519481 TMEM98Q9Y2Y6 226 aa10.82□□□□□ -0.68
PVT1-208ENST00000519481 HEMK1Q9Y5R4 338 aaPredicted RBP10.82□□□□□ -0.68
PVT1-208ENST00000519481 ATMQ13315 3056 aa10.82□□□□□ -0.68
PVT1-208ENST00000519481 IGHV5-10-1A0A0J9YXX1 117 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 C9orf172C9J069 976 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 STMND1H3BQB6 276 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 INPP4BO15327 924 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 ZIC2O95409 532 aaPredicted RBP10.81□□□□□ -0.68
PVT1-208ENST00000519481 FUCA1P04066 466 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 CD48P09326 243 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 H2AFZP0C0S5 128 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 SLC2A4P14672 509 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 IL4RP24394 825 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 CD1CP29017 333 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 STC1P52823 247 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 LIMK2P53671 638 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 GPLD1P80108 840 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 DSC2Q02487 901 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 PTSQ03393 145 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 DPYSL3Q14195 570 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 PTPRRQ15256 657 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 PYCR3Q53H96 274 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 ANKRD20A8PQ5CZ79 823 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 NCBP2-AS2Q69YL0 99 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 H2AFVQ71UI9 128 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 TMPRSS9Q7Z410 1059 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 CCNYQ8ND76 341 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 LPCAT1Q8NF37 534 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 OR4D9Q8NGE8 314 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 OR10G6Q8NH81 332 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 FAM71BQ8TC56 605 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 CCHCR1Q8TD31 782 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 PATE1Q8WXA2 126 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 CTNNBL1Q8WYA6 563 aaPredicted RBP10.81□□□□□ -0.68
PVT1-208ENST00000519481 SCAMP4Q969E2 229 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 FATE1Q969F0 183 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 SCARF2Q96GP6 870 aaPredicted RBP10.81□□□□□ -0.68
PVT1-208ENST00000519481 CCDC74BQ96LY2 380 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 SLC38A3Q99624 504 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 ANP32EQ9BTT0 268 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 RIOK2Q9BVS4 552 aaKnown RBP10.81□□□□□ -0.68
PVT1-208ENST00000519481 TDRD1Q9BXT4 1180 aaKnown RBP10.81□□□□□ -0.68
PVT1-208ENST00000519481 CBX8Q9HC52 389 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 PCDH9Q9HC56 1237 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 PKD2L2Q9NZM6 624 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 FOXJ2Q9P0K8 574 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 UVRAGQ9P2Y5 699 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 ZNHIT2Q9UHR6 403 aa10.81□□□□□ -0.68
PVT1-208ENST00000519481 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.81□□□□□ -0.683e-7■■■■□ 23
PVT1-208ENST00000519481 IGHV1OR21-1A0A087WYE8 117 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 C1orf232A0A0U1RR37 186 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.8□□□□□ -0.68
PVT1-208ENST00000519481 PPM1DO15297 605 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 DUX1O43812 170 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 SLC28A2O43868 658 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 PROSCO94903 275 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 MAP3K6O95382 1288 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 CCL4P13236 92 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 MAN1A1P33908 653 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 PBX1P40424 430 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 NOP2P46087 812 aaKnown RBP10.8□□□□□ -0.68
PVT1-208ENST00000519481 FASLGP48023 281 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 ARSEP51690 589 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 SQSTM1Q13501 440 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 ALG1LQ6GMV1 187 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 RFLNAQ6ZTI6 216 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 TRIM74Q86UV6 250 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 VASH2Q86V25 355 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 LUZP1Q86V48 1076 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 DTX1Q86Y01 620 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 CCDC13Q8IYE1 715 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 IL22RA1Q8N6P7 574 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 RCBTB1Q8NDN9 531 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 PTCD2Q8WV60 388 aaKnown RBP10.8□□□□□ -0.68
PVT1-208ENST00000519481 SH3KBP1Q96B97 665 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 FUCA2Q9BTY2 467 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 MLPHQ9BV36 600 aaPredicted RBP10.8□□□□□ -0.68
PVT1-208ENST00000519481 ADGRE3Q9BY15 652 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 ASPSCR1Q9BZE9 553 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 DEF6Q9H4E7 631 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 RMI1Q9H9A7 625 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 VPS18Q9P253 973 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 PCDHGA4Q9Y5G9 962 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 PCDHGA3Q9Y5H0 932 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 SPTA1P02549 2419 aa10.8□□□□□ -0.68
PVT1-208ENST00000519481 TRBV23OR9-2A0A075B6M9 112 aa10.79□□□□□ -0.68
PVT1-208ENST00000519481 A0A0U1RQS6 177 aa10.79□□□□□ -0.68
PVT1-208ENST00000519481 SYCE3A1L190 88 aa10.79□□□□□ -0.68
PVT1-208ENST00000519481 RGSL1A5PLK6 1076 aa10.79□□□□□ -0.68
PVT1-208ENST00000519481 CLDN7O95471 211 aa10.79□□□□□ -0.68
PVT1-208ENST00000519481 SOD1P00441 154 aa10.79□□□□□ -0.68
PVT1-208ENST00000519481 JCHAINP01591 159 aa10.79□□□□□ -0.68
PVT1-208ENST00000519481 FGF3P11487 239 aaPredicted RBP10.79□□□□□ -0.68
PVT1-208ENST00000519481 RAB15P59190 212 aa10.79□□□□□ -0.68
PVT1-208ENST00000519481 HHEXQ03014 270 aa10.79□□□□□ -0.68
PVT1-208ENST00000519481 NFATC3Q12968 1075 aa10.79□□□□□ -0.68
PVT1-208ENST00000519481 SRSF6Q13247 344 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms