RNA–Protein interactions for RNA: ENST00000517656.5

CTNNA1-204, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-204ENST00000517656 PCDHGA3Q9Y5H0 932 aa8.39□□□□□ -1.07
CTNNA1-204ENST00000517656 TLN1Q9Y490 2541 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-204ENST00000517656 SPTA1P02549 2419 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 IGHV1OR21-1A0A087WYE8 117 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 A0A087X0T9 212 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 A0A0U1RQS6 177 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 STMND1H3BQB6 276 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 FAM228BP0C875 321 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 THRAP10827 490 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 FGF3P11487 239 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 CCL4P13236 92 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 CA4P22748 312 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 CCNCP24863 283 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 SSR1P43307 286 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 FASLGP48023 281 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 EPHB1P54762 984 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 RPL26P61254 145 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 TPM4P67936 248 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 FANCCQ00597 558 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 DSC2Q02487 901 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 LRP8Q14114 963 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 IHHQ14623 411 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 IFI16Q16666 785 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 PYCR3Q53H96 274 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 ANKRD20A8PQ5CZ79 823 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 CCDC122Q5T0U0 273 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 ALKBH5Q6P6C2 394 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 TRIM74Q86UV6 250 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 VASH2Q86V25 355 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 GALNT13Q8IUC8 556 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 NRSN1Q8IZ57 195 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 RCBTB1Q8NDN9 531 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 OR4D9Q8NGE8 314 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 EXD1Q8NHP7 514 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 ARRDC2Q8TBH0 407 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 ZNF564Q8TBZ8 553 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 FAF2Q96CS3 445 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 CCDC74BQ96LY2 380 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 TSGA13Q96PP4 275 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 TAAR9Q96RI9 348 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 LYSMD1Q96S90 227 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 AGAP2Q99490 1192 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 ZNF670Q9BS34 389 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 CBX8Q9HC52 389 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 RBM22Q9NW64 420 aaKnown RBP eCLIP8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 CAPN11Q9UMQ6 739 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 NENFQ9UMX5 172 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 RPL26L1Q9UNX3 145 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 TMEM98Q9Y2Y6 226 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 PLEKHM1Q9Y4G2 1056 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 MYO18BQ8IUG5 2567 aa8.38□□□□□ -1.07
CTNNA1-204ENST00000517656 SCN8AQ9UQD0 1980 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 UBR5O95071 2799 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 SLC28A2O43868 658 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 PROSCO94903 275 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 MAP3K6O95382 1288 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 PRLP01236 227 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 HLA-DQB2P05538 268 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 WT1P19544 449 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 MX2P20592 715 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 CSF2RBP32927 897 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 ARSDP51689 593 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 UBASH3AP57075 661 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 GPLD1P80108 840 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 GBE1Q04446 702 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 NIPAL4Q0D2K0 466 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 PDK2Q15119 407 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 NFKBIBQ15653 356 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 ATP13A4Q4VNC1 1196 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 NKAIN2Q5VXU1 208 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 TMEM71Q6P5X7 295 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 MARK2Q7KZI7 788 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 LUZP1Q86V48 1076 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 CPNE8Q86YQ8 564 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 MAP7D3Q8IWC1 876 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 SFRP1Q8N474 314 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 ZSCAN1Q8NBB4 408 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 KCTD6Q8NC69 237 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 AGBL5Q8NDL9 886 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 CCDC112Q8NEF3 446 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 LPCAT1Q8NF37 534 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 SLC37A2Q8TED4 501 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 CPLX3Q8WVH0 158 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 EXTL1Q92935 676 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 PMEPA1Q969W9 287 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 ARHGAP9Q9BRR9 750 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 RIOK2Q9BVS4 552 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 DDA1Q9BW61 102 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 PCDH9Q9HC56 1237 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 KCNK4Q9NYG8 393 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 VPS18Q9P253 973 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 PDP2Q9P2J9 529 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 UVRAGQ9P2Y5 699 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 LCMT1Q9UIC8 334 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 CNOT6Q9ULM6 557 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 CHKBQ9Y259 395 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 LUC7L2Q9Y383 392 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 TTLL3Q9Y4R7 772 aa8.37□□□□□ -1.07
CTNNA1-204ENST00000517656 UNC13CQ8NB66 2214 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms