RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 PLD3Q8IV08 490 aa0.29□□□□□ -2.36
SCARNA23-201ENST00000516060 ZNF547Q8IVP9 402 aa0.29□□□□□ -2.36
SCARNA23-201ENST00000516060 LSMEM2Q8N112 164 aa0.29□□□□□ -2.36
SCARNA23-201ENST00000516060 PRPF38AQ8NAV1 312 aaKnown RBP0.29□□□□□ -2.36
SCARNA23-201ENST00000516060 HERVK_113Q902F9 699 aa0.29□□□□□ -2.36
SCARNA23-201ENST00000516060 SERAC1Q96JX3 654 aa0.29□□□□□ -2.36
SCARNA23-201ENST00000516060 DRC1Q96MC2 740 aa0.29□□□□□ -2.36
SCARNA23-201ENST00000516060 DDX24Q9GZR7 859 aaKnown RBP eCLIP0.29□□□□□ -2.36
SCARNA23-201ENST00000516060 WWTR1Q9GZV5 400 aa0.29□□□□□ -2.36
SCARNA23-201ENST00000516060 ASB8Q9H765 288 aa0.29□□□□□ -2.36
SCARNA23-201ENST00000516060 DNAJB4Q9UDY4 337 aa0.29□□□□□ -2.36
SCARNA23-201ENST00000516060 MUC6Q6W4X9 2439 aa0.29□□□□□ -2.36
SCARNA23-201ENST00000516060 GAKO14976 1311 aa0.29□□□□□ -2.36
SCARNA23-201ENST00000516060 TENM3Q9P273 2699 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 WI2-2373I1.2A0A1W2PRP0 233 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 FAM234BA2RU67 622 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 ZNF840PA6NDX5 716 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 MGEA5O60502 916 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 LRP3O75074 770 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 SLCO2B1O94956 709 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 GLP2RO95838 553 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 SERPINC1P01008 464 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 G6PDP11413 515 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 IBSPP21815 317 aaPredicted RBP0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 RRM1P23921 792 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 RYKP34925 604 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 NKX2-1P43699 371 aaPredicted RBP0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 MAPK9P45984 424 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 MBTD1Q05BQ5 628 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 CALCOCO2Q13137 446 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 FASTKD3Q14CZ7 662 aaKnown RBP0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 PUM3Q15397 648 aaKnown RBP0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 TEAD2Q15562 447 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 SGSM1Q2NKQ1 1148 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 ZNF776Q68DI1 518 aaPredicted RBP0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 PSRC1Q6PGN9 363 aaPredicted RBP0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 MTSS1LQ765P7 747 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 BEND5Q7L4P6 421 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 IQCHQ86VS3 1027 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 CD177Q8N6Q3 437 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 TMEM178AQ8NBL3 297 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 RBM15BQ8NDT2 890 aaKnown RBP0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 AGBL3Q8NEM8 1001 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 TMEM170AQ8WVE7 144 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 ST6GALNAC6Q969X2 333 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 ARRDC3Q96B67 414 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 NUS1Q96E22 293 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 PHYHIPLQ96FC7 376 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 PDLIM5Q96HC4 596 aaKnown RBP0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 PRICKLE1Q96MT3 831 aaPredicted RBP0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 EBF4Q9BQW3 602 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 ZNF577Q9BSK1 485 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 RHOBTB2Q9BYZ6 727 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 P2RY12Q9H244 342 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 ESRP2Q9H6T0 727 aaKnown RBP0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 LIN7CQ9NUP9 197 aaKnown RBP0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 MARCH4Q9P2E8 410 aaPredicted RBP0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 MYO1AQ9UBC5 1043 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 RCOR1Q9UKL0 485 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 RCE1Q9Y256 329 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 PTPRCP08575 1304 aa0.28□□□□□ -2.36
SCARNA23-201ENST00000516060 ZNFX1Q9P2E3 1918 aaKnown RBP0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 TYW5A2RUC4 315 aaKnown RBP0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 ERVV-1B6SEH8 477 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 GOLIM4O00461 696 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 NCAM2O15394 837 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 HNRNPRO43390 633 aaKnown RBP0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 PDE9AO76083 593 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 MTA2O94776 668 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 CT47B1P0C2W7 299 aaPredicted RBP0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 PEX2P28328 305 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 BDKRB2P30411 391 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 AKT1P31749 480 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 GJC1P36383 396 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 EIF2S3LQ2VIR3 472 aaKnown RBP0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 OLFML2AQ68BL7 652 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 KCTD18Q6PI47 426 aaPredicted RBP0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 FBXO46Q6PJ61 603 aaPredicted RBP0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 ZNF704Q6ZNC4 412 aaPredicted RBP0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 C11orf96Q7Z7L8 435 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 TSPAN33Q86UF1 283 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 LURAP1LQ8IV03 231 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 TPH2Q8IWU9 490 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 ABHD12Q8N2K0 398 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 DCLK2Q8N568 766 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 ZNF561Q8N587 486 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 SETD9Q8NE22 299 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 GJC3Q8NFK1 279 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 OR5R1Q8NH85 324 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 SLC2A12Q8TD20 617 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 SSC4DQ8WTU2 575 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 HMGB4Q8WW32 186 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 HOOK2Q96ED9 719 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 ZNF799Q96GE5 643 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 RIPOR3Q96MK2 946 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 QRFPRQ96P65 431 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 KRT12Q99456 494 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 PNPLA8Q9NP80 782 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 BABAM1Q9NWV8 329 aa0.27□□□□□ -2.37
SCARNA23-201ENST00000516060 MAN2B2Q9Y2E5 1009 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms