RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 ACTR1AP61163 376 aa17.39■□□□□ 0.37
DDX41-217ENST00000515562 ZFP36L1Q07352 338 aaKnown RBP17.39■□□□□ 0.37
DDX41-217ENST00000515562 ZBTB17Q13105 803 aa17.39■□□□□ 0.37
DDX41-217ENST00000515562 PDK1Q15118 436 aa17.39■□□□□ 0.37
DDX41-217ENST00000515562 GALNT13Q8IUC8 556 aa17.39■□□□□ 0.37
DDX41-217ENST00000515562 RNF214Q8ND24 703 aa17.39■□□□□ 0.37
DDX41-217ENST00000515562 CCHCR1Q8TD31 782 aa17.39■□□□□ 0.37
DDX41-217ENST00000515562 PTCD2Q8WV60 388 aaKnown RBP17.39■□□□□ 0.37
DDX41-217ENST00000515562 COX14Q96I36 57 aa17.39■□□□□ 0.37
DDX41-217ENST00000515562 CMKLR1Q99788 373 aa17.39■□□□□ 0.37
DDX41-217ENST00000515562 MLPHQ9BV36 600 aaPredicted RBP17.39■□□□□ 0.37
DDX41-217ENST00000515562 RIOK2Q9BVS4 552 aaKnown RBP17.39■□□□□ 0.37
DDX41-217ENST00000515562 DDX56Q9NY93 547 aaKnown RBP17.39■□□□□ 0.37
DDX41-217ENST00000515562 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.39■□□□□ 0.37
DDX41-217ENST00000515562 PKD2L2Q9NZM6 624 aa17.39■□□□□ 0.37
DDX41-217ENST00000515562 VPS18Q9P253 973 aa17.39■□□□□ 0.37
DDX41-217ENST00000515562 ATXN7L1Q9ULK2 861 aaPredicted RBP17.39■□□□□ 0.37
DDX41-217ENST00000515562 SSUH2Q9Y2M2 353 aa17.39■□□□□ 0.37
DDX41-217ENST00000515562 LOXL2Q9Y4K0 774 aa17.39■□□□□ 0.37
DDX41-217ENST00000515562 RGSL1A5PLK6 1076 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 ERVH48-1M5A8F1 160 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 CLDN7O95471 211 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 ECEL1O95672 775 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 CPNE6O95741 557 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 MMP2P08253 660 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 GPR3P46089 330 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 B4GALNT1Q00973 533 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 RHDQ02161 417 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 VAC14Q08AM6 782 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 AP1B1Q10567 949 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 PYCR3Q53H96 274 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 TRIM74Q86UV6 250 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 PIM3Q86V86 326 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 SLITRK4Q8IW52 837 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 RHOT1Q8IXI2 618 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 SNRNP27Q8WVK2 155 aaKnown RBP17.38■□□□□ 0.37
DDX41-217ENST00000515562 SLC39A7Q92504 469 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 OLFM3Q96PB7 478 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 BRD8Q9H0E9 1235 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 CPNE5Q9HCH3 593 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 PISDQ9UG56 409 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 ACSL6Q9UKU0 697 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 TMEM98Q9Y2Y6 226 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 ST14Q9Y5Y6 855 aa17.38■□□□□ 0.37
DDX41-217ENST00000515562 SCN8AQ9UQD0 1980 aa17.37■□□□□ 0.37
DDX41-217ENST00000515562 ANKRD66B4E2M5 251 aa17.37■□□□□ 0.37
DDX41-217ENST00000515562 AKR1B15C9JRZ8 316 aaPredicted RBP17.37■□□□□ 0.37
DDX41-217ENST00000515562 INPP4BO15327 924 aa17.37■□□□□ 0.37
DDX41-217ENST00000515562 SLC5A2P31639 672 aa17.37■□□□□ 0.37
DDX41-217ENST00000515562 SPINT3P49223 89 aa17.37■□□□□ 0.37
DDX41-217ENST00000515562 TCEAL1Q15170 157 aa17.37■□□□□ 0.37
DDX41-217ENST00000515562 QPCTQ16769 361 aa17.37■□□□□ 0.37
DDX41-217ENST00000515562 PHF19Q5T6S3 580 aa17.37■□□□□ 0.37
DDX41-217ENST00000515562 HENMT1Q5T8I9 393 aaKnown RBP17.37■□□□□ 0.37
DDX41-217ENST00000515562 ARHGAP40Q5TG30 622 aa17.37■□□□□ 0.37
DDX41-217ENST00000515562 MARK2Q7KZI7 788 aaKnown RBP17.37■□□□□ 0.37
DDX41-217ENST00000515562 JAMLQ86YT9 394 aa17.37■□□□□ 0.37
DDX41-217ENST00000515562 RFX6Q8HWS3 928 aa17.37■□□□□ 0.37
DDX41-217ENST00000515562 NAGSQ8N159 534 aa17.37■□□□□ 0.37
DDX41-217ENST00000515562 CNTD1Q8N815 330 aa17.37■□□□□ 0.37
DDX41-217ENST00000515562 AGAP2Q99490 1192 aa17.37■□□□□ 0.37
DDX41-217ENST00000515562 AKAP7Q9P0M2 348 aaPredicted RBP17.37■□□□□ 0.37
DDX41-217ENST00000515562 UNC13CQ8NB66 2214 aa17.37■□□□□ 0.37
DDX41-217ENST00000515562 NVLO15381 856 aaKnown RBP17.36■□□□□ 0.37
DDX41-217ENST00000515562 SPOPO43791 374 aa17.36■□□□□ 0.37
DDX41-217ENST00000515562 ASMTLO95671 621 aa17.36■□□□□ 0.37
DDX41-217ENST00000515562 HGFP14210 728 aa17.36■□□□□ 0.37
DDX41-217ENST00000515562 ALDH4A1P30038 563 aa17.36■□□□□ 0.37
DDX41-217ENST00000515562 CLN3Q13286 438 aa17.36■□□□□ 0.37
DDX41-217ENST00000515562 SLC14A2Q15849 920 aa17.36■□□□□ 0.37
DDX41-217ENST00000515562 AMZ1Q400G9 498 aa17.36■□□□□ 0.37
DDX41-217ENST00000515562 NT5DC3Q86UY8 548 aa17.36■□□□□ 0.37
DDX41-217ENST00000515562 PATE1Q8WXA2 126 aa17.36■□□□□ 0.37
DDX41-217ENST00000515562 RNF25Q96BH1 459 aaPredicted RBP17.36■□□□□ 0.37
DDX41-217ENST00000515562 IMP4Q96G21 291 aaKnown RBP17.36■□□□□ 0.37
DDX41-217ENST00000515562 FAM83DQ9H4H8 585 aa17.36■□□□□ 0.37
DDX41-217ENST00000515562 RMI1Q9H9A7 625 aa17.36■□□□□ 0.37
DDX41-217ENST00000515562 RDH14Q9HBH5 336 aa17.36■□□□□ 0.37
DDX41-217ENST00000515562 ZFC3H1O60293 1989 aaKnown RBP17.35■□□□□ 0.37
DDX41-217ENST00000515562 HGSO14964 777 aaPredicted RBP17.35■□□□□ 0.37
DDX41-217ENST00000515562 B4GAT1O43505 415 aa17.35■□□□□ 0.37
DDX41-217ENST00000515562 PSTPIP1O43586 416 aa17.35■□□□□ 0.37
DDX41-217ENST00000515562 FASLGP48023 281 aa17.35■□□□□ 0.37
DDX41-217ENST00000515562 OR1D5P58170 312 aa17.35■□□□□ 0.37
DDX41-217ENST00000515562 DYNLT1P63172 113 aa17.35■□□□□ 0.37
DDX41-217ENST00000515562 TBX2Q13207 712 aaPredicted RBP17.35■□□□□ 0.37
DDX41-217ENST00000515562 GALNT3Q14435 633 aa17.35■□□□□ 0.37
DDX41-217ENST00000515562 BZW1Q7L1Q6 419 aaKnown RBP17.35■□□□□ 0.37
DDX41-217ENST00000515562 LYSMD3Q7Z3D4 306 aa17.35■□□□□ 0.37
DDX41-217ENST00000515562 TMPRSS9Q7Z410 1059 aa17.35■□□□□ 0.37
DDX41-217ENST00000515562 AGAP3Q96P47 875 aa17.35■□□□□ 0.37
DDX41-217ENST00000515562 TRIB3Q96RU7 358 aa17.35■□□□□ 0.37
DDX41-217ENST00000515562 DPYSL5Q9BPU6 564 aa17.35■□□□□ 0.37
DDX41-217ENST00000515562 CEP41Q9BYV8 373 aa17.35■□□□□ 0.37
DDX41-217ENST00000515562 SLC25A51Q9H1U9 297 aa17.35■□□□□ 0.37
DDX41-217ENST00000515562 SEMA6CQ9H3T2 930 aa17.35■□□□□ 0.37
DDX41-217ENST00000515562 SEPT10Q9P0V9 454 aa17.35■□□□□ 0.37
DDX41-217ENST00000515562 BAHCC1Q9P281 2608 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 FADS2P1A8MWK0 482 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 K7ENP7 123 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms