RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 ILF3Q12906 894 aaKnown RBP eCLIP12.71□□□□□ -0.37
CLCN3-210ENST00000515420 CAMK2BQ13554 666 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 SLC1A5Q15758 541 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 ANKRD20A2Q5SQ80 823 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 SEL1L2Q5TEA6 688 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 HES3Q5TGS1 186 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 ANKRD20A1Q5TYW2 823 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 ANKRD20A3Q5VUR7 823 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 ZDHHC20Q5W0Z9 365 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 KCTD16Q68DU8 428 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 AADACL2Q6P093 401 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 DARS2Q6PI48 645 aaKnown RBP12.71□□□□□ -0.37
CLCN3-210ENST00000515420 RFLNAQ6ZTI6 216 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 KDELC2Q7Z4H8 507 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 KLHDC8BQ8IXV7 354 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 PDCD7Q8N8D1 485 aaKnown RBP12.71□□□□□ -0.37
CLCN3-210ENST00000515420 IFI44Q8TCB0 444 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 DTX3LQ8TDB6 740 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 GPBAR1Q8TDU6 330 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 EID2BQ96D98 161 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 OXNAD1Q96HP4 312 aaPredicted RBP12.71□□□□□ -0.37
CLCN3-210ENST00000515420 SPATA13Q96N96 652 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 PLEKHG4BQ96PX9 1271 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 ZSCAN5AQ9BUG6 496 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 FSD1LQ9BXM9 530 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 GSDMCQ9BYG8 508 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 FRMD8P1Q9BZ68 369 aaPredicted RBP12.71□□□□□ -0.37
CLCN3-210ENST00000515420 GPR63Q9BZJ6 419 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 CARS2Q9HA77 564 aaKnown RBP12.71□□□□□ -0.37
CLCN3-210ENST00000515420 MRPL40Q9NQ50 206 aaKnown RBP12.71□□□□□ -0.37
CLCN3-210ENST00000515420 UBP1Q9NZI7 540 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.71□□□□□ -0.37
CLCN3-210ENST00000515420 GPR34Q9UPC5 381 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 SSUH2Q9Y2M2 353 aa12.71□□□□□ -0.37
CLCN3-210ENST00000515420 AAR2Q9Y312 384 aaKnown RBP12.71□□□□□ -0.37
CLCN3-210ENST00000515420 EPG5Q9HCE0 2579 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 GOLGA6L3A6NEY3 463 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 C5orf60A6NFR6 353 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 GPR89AB7ZAQ6 455 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 KCNN4O15554 427 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 OPA1O60313 960 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 PPFIA2O75334 1257 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 GPR89BP0CG08 455 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 JUPP14923 745 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 INSM1Q01101 510 aaPredicted RBP12.7□□□□□ -0.38
CLCN3-210ENST00000515420 LRP8Q14114 963 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 PRPSAP1Q14558 356 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 MEI1Q5TIA1 1274 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 CDCP2Q5VXM1 449 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 GUSBP11Q6P575 273 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 OGFOD3Q6PK18 319 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 TAF8Q7Z7C8 310 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 TRAM1L1Q8N609 369 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 DCBLD1Q8N8Z6 715 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 GPR156Q8NFN8 814 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 TRIM58Q8NG06 486 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 SLC35B2Q8TB61 432 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 GRAMD1AQ96CP6 724 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 AGAP2Q99490 1192 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 TMEM168Q9H0V1 697 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 CARD9Q9H257 536 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 RMI1Q9H9A7 625 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 MOSPD1Q9UJG1 213 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 PADI4Q9UM07 663 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 SUFUQ9UMX1 484 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 SHOC2Q9UQ13 582 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 CLCA2Q9UQC9 943 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 FREM2Q5SZK8 3169 aa12.7□□□□□ -0.38
CLCN3-210ENST00000515420 COL27A1Q8IZC6 1860 aaPredicted RBP12.7□□□□□ -0.38
CLCN3-210ENST00000515420 ZNF106Q9H2Y7 1883 aaKnown RBP12.7□□□□□ -0.38
CLCN3-210ENST00000515420 TCEA3O75764 348 aa12.69□□□□□ -0.38
CLCN3-210ENST00000515420 FUCA1P04066 466 aa12.69□□□□□ -0.38
CLCN3-210ENST00000515420 PIRTP0C851 137 aa12.69□□□□□ -0.38
CLCN3-210ENST00000515420 SIRPB2Q5JXA9 342 aa12.69□□□□□ -0.38
CLCN3-210ENST00000515420 ZNF569Q5MCW4 686 aa12.69□□□□□ -0.38
CLCN3-210ENST00000515420 FAM182AQ5T1J6 154 aa12.69□□□□□ -0.38
CLCN3-210ENST00000515420 NYAP1Q6ZVC0 841 aa12.69□□□□□ -0.38
CLCN3-210ENST00000515420 EFL1Q7Z2Z2 1120 aaKnown RBP12.69□□□□□ -0.38
CLCN3-210ENST00000515420 KYQ8NBH2 561 aa12.69□□□□□ -0.38
CLCN3-210ENST00000515420 GPR26Q8NDV2 337 aa12.69□□□□□ -0.38
CLCN3-210ENST00000515420 IPMKQ8NFU5 416 aa12.69□□□□□ -0.38
CLCN3-210ENST00000515420 LRRC45Q96CN5 670 aa12.69□□□□□ -0.38
CLCN3-210ENST00000515420 RTP4Q96DX8 246 aa12.69□□□□□ -0.38
CLCN3-210ENST00000515420 OR2M4Q96R27 311 aa12.69□□□□□ -0.38
CLCN3-210ENST00000515420 C19orf43Q9BQ61 176 aa12.69□□□□□ -0.38
CLCN3-210ENST00000515420 GORASP1Q9BQQ3 440 aa12.69□□□□□ -0.38
CLCN3-210ENST00000515420 NRSN2Q9GZP1 204 aa12.69□□□□□ -0.38
CLCN3-210ENST00000515420 ABCG4Q9H172 646 aa12.69□□□□□ -0.38
CLCN3-210ENST00000515420 CNOT6Q9ULM6 557 aaKnown RBP12.69□□□□□ -0.38
CLCN3-210ENST00000515420 IGF2RP11717 2491 aa12.69□□□□□ -0.38
CLCN3-210ENST00000515420 ASPMQ8IZT6 3477 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 CPED1A4D0V7 1026 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 FADS2P1A8MWK0 482 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 NOBOXO60393 691 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 DNAJC6O75061 913 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 MT-CO3P00414 261 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 CAPNS1P04632 268 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 PNLIPP16233 465 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 GLB1P16278 677 aa12.68□□□□□ -0.38
CLCN3-210ENST00000515420 BPIP17213 487 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms