RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 PPP1R3EQ9H7J1 279 aa3.37□□□□□ -1.87
NEDD4-211ENST00000514893 ZBTB20Q9HC78 741 aaPredicted RBP3.37□□□□□ -1.87
NEDD4-211ENST00000514893 ACAD8Q9UKU7 415 aa3.37□□□□□ -1.87
NEDD4-211ENST00000514893 FAM96BQ9Y3D0 163 aa3.37□□□□□ -1.87
NEDD4-211ENST00000514893 JRKLQ9Y4A0 524 aa3.37□□□□□ -1.87
NEDD4-211ENST00000514893 A0A1W2PPI3 338 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 FAM90A7PA6NKC0 464 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 A6NL46 340 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 DUXAA6NLW8 204 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 FAM90A22PA8MWA6 464 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 FAM90A12PA8MX19 464 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 FAM90A23PA8MXZ1 464 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 RTL8CO15255 209 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 FAM155BO75949 473 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 KRT18P05783 430 aaKnown RBP3.36□□□□□ -1.87
NEDD4-211ENST00000514893 CSF2RAP15509 400 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 GATA2P23769 480 aaPredicted RBP3.36□□□□□ -1.87
NEDD4-211ENST00000514893 FASLGP48023 281 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 MLLT10P55197 1068 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 CSNK2A1P68400 391 aaPredicted RBP3.36□□□□□ -1.87
NEDD4-211ENST00000514893 KCNJ10P78508 379 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 PLIN5Q00G26 463 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 FOXM1Q08050 763 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 KIR2DS3Q14952 304 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 TIGD6Q17RP2 521 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 C2orf68Q2NKX9 166 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 ZNF774Q6NX45 483 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 RSRC2Q7L4I2 434 aaKnown RBP3.36□□□□□ -1.87
NEDD4-211ENST00000514893 TADA2BQ86TJ2 420 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 CDC20BQ86Y33 519 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 ZBTB2Q8N680 514 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 CSNK2A3Q8NEV1 391 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 MRGPRDQ8TDS7 321 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 GRHL3Q8TE85 626 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 NOC3LQ8WTT2 800 aaKnown RBP3.36□□□□□ -1.87
NEDD4-211ENST00000514893 LTV1Q96GA3 475 aaPredicted RBP3.36□□□□□ -1.87
NEDD4-211ENST00000514893 BBS4Q96RK4 519 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 SNTG1Q9NSN8 517 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 TCP11L1Q9NUJ3 509 aa3.36□□□□□ -1.87
NEDD4-211ENST00000514893 PRR32B1ATL7 298 aa3.35□□□□□ -1.87
NEDD4-211ENST00000514893 TEX22C9J3V5 150 aa3.35□□□□□ -1.87
NEDD4-211ENST00000514893 TK1P04183 234 aa3.35□□□□□ -1.87
NEDD4-211ENST00000514893 ACADSP16219 412 aa3.35□□□□□ -1.87
NEDD4-211ENST00000514893 ACTR2P61160 394 aa3.35□□□□□ -1.87
NEDD4-211ENST00000514893 GRIK3Q13003 919 aa3.35□□□□□ -1.87
NEDD4-211ENST00000514893 SNAI3Q3KNW1 292 aa3.35□□□□□ -1.87
NEDD4-211ENST00000514893 KRTCAP3Q53RY4 240 aa3.35□□□□□ -1.87
NEDD4-211ENST00000514893 PCDH20Q8N6Y1 951 aaKnown RBP3.35□□□□□ -1.87
NEDD4-211ENST00000514893 THAP6Q8TBB0 222 aa3.35□□□□□ -1.87
NEDD4-211ENST00000514893 ABHD8Q96I13 439 aa3.35□□□□□ -1.87
NEDD4-211ENST00000514893 GMPPAQ96IJ6 420 aaPredicted RBP3.35□□□□□ -1.87
NEDD4-211ENST00000514893 GEMIN8Q9NWZ8 242 aaKnown RBP3.35□□□□□ -1.87
NEDD4-211ENST00000514893 KIAA1456Q9P272 454 aa3.35□□□□□ -1.87
NEDD4-211ENST00000514893 PEMTQ9UBM1 199 aa3.35□□□□□ -1.87
NEDD4-211ENST00000514893 ERVK-11Q9UQG0 969 aa3.35□□□□□ -1.87
NEDD4-211ENST00000514893 DNAJC16Q9Y2G8 782 aa3.35□□□□□ -1.87
NEDD4-211ENST00000514893 RRP7AQ9Y3A4 280 aaKnown RBP3.35□□□□□ -1.87
NEDD4-211ENST00000514893 CSAG2Q9Y5P2 127 aa3.35□□□□□ -1.87
NEDD4-211ENST00000514893 SLCO1B7G3V0H7 640 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 EIF3DO15371 548 aaKnown RBP eCLIP3.34□□□□□ -1.87
NEDD4-211ENST00000514893 SPINT2O43291 252 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 NR3C1P04150 777 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 SETSIPP0DME0 302 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 SHMT1P34896 483 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 ADD2P35612 726 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 SPOCK1Q08629 439 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 PEX6Q13608 980 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 FBXO46Q6PJ61 603 aaPredicted RBP3.34□□□□□ -1.87
NEDD4-211ENST00000514893 GPR180Q86V85 440 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 MAP7D3Q8IWC1 876 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 SLC35F3Q8IY50 421 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 CACNA2D3Q8IZS8 1091 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 ADSSL1Q8N142 457 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 ZNF614Q8N883 585 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 RDM1Q8NG50 284 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 AFG1LQ8WV93 481 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 ZNRF4Q8WWF5 429 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 ORAI1Q96D31 301 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 C18orf12Q96KH6 178 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 NOD2Q9HC29 1040 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 ATAD3AQ9NVI7 634 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 KIF17Q9P2E2 1029 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 MARCH4Q9P2E8 410 aaPredicted RBP3.34□□□□□ -1.87
NEDD4-211ENST00000514893 CTNNAL1Q9UBT7 734 aa3.34□□□□□ -1.87
NEDD4-211ENST00000514893 IPO5O00410 1097 aaKnown RBP3.33□□□□□ -1.88
NEDD4-211ENST00000514893 PEX12O00623 359 aa3.33□□□□□ -1.88
NEDD4-211ENST00000514893 MYL1P05976 194 aa3.33□□□□□ -1.88
NEDD4-211ENST00000514893 HEXAP06865 529 aa3.33□□□□□ -1.88
NEDD4-211ENST00000514893 POU1F1P28069 291 aa3.33□□□□□ -1.88
NEDD4-211ENST00000514893 GNALP38405 381 aa3.33□□□□□ -1.88
NEDD4-211ENST00000514893 RPP30P78346 268 aaKnown RBP3.33□□□□□ -1.88
NEDD4-211ENST00000514893 FOXD4Q12950 439 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-211ENST00000514893 ACVR2BQ13705 512 aa3.33□□□□□ -1.88
NEDD4-211ENST00000514893 BLMHQ13867 455 aa3.33□□□□□ -1.88
NEDD4-211ENST00000514893 MYLK3Q32MK0 819 aa3.33□□□□□ -1.88
NEDD4-211ENST00000514893 TCTEX1D4Q5JR98 221 aa3.33□□□□□ -1.88
NEDD4-211ENST00000514893 FRG2Q64ET8 278 aa3.33□□□□□ -1.88
NEDD4-211ENST00000514893 XRRA1Q6P2D8 792 aa3.33□□□□□ -1.88
NEDD4-211ENST00000514893 SH2D5Q6ZV89 423 aa3.33□□□□□ -1.88
NEDD4-211ENST00000514893 FBXL16Q8N461 479 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms