RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 IFI16Q16666 785 aaKnown RBP12.14□□□□□ -0.47
SNHG4-208ENST00000514110 CLPPQ16740 277 aaPredicted RBP12.14□□□□□ -0.47
SNHG4-208ENST00000514110 HADHQ16836 314 aaKnown RBP12.14□□□□□ -0.47
SNHG4-208ENST00000514110 CCDC122Q5T0U0 273 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 ALKBH5Q6P6C2 394 aaKnown RBP12.14□□□□□ -0.47
SNHG4-208ENST00000514110 ZNF765Q7L2R6 523 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 NLRP8Q86W28 1048 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 ZNF761Q86XN6 746 aaPredicted RBP12.14□□□□□ -0.47
SNHG4-208ENST00000514110 NDUFAF2Q8N183 169 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 ARRDC2Q8TBH0 407 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 ZNF564Q8TBZ8 553 aaPredicted RBP12.14□□□□□ -0.47
SNHG4-208ENST00000514110 JPH3Q8WXH2 748 aaPredicted RBP12.14□□□□□ -0.47
SNHG4-208ENST00000514110 COX14Q96I36 57 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 RIOK2Q9BVS4 552 aaKnown RBP12.14□□□□□ -0.47
SNHG4-208ENST00000514110 TDRD1Q9BXT4 1180 aaKnown RBP12.14□□□□□ -0.47
SNHG4-208ENST00000514110 B3GNT4Q9C0J1 378 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 RBM22Q9NW64 420 aaKnown RBP eCLIP12.14□□□□□ -0.47
SNHG4-208ENST00000514110 AKAP7Q9P0M2 348 aaPredicted RBP12.14□□□□□ -0.47
SNHG4-208ENST00000514110 TMEM9Q9P0T7 183 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 CAPN11Q9UMQ6 739 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 NENFQ9UMX5 172 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 TTLL3Q9Y4R7 772 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 PCDHGA4Q9Y5G9 962 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 COL6A6A6NMZ7 2263 aa12.14□□□□□ -0.47
SNHG4-208ENST00000514110 TRBV23OR9-2A0A075B6M9 112 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 ZW10O43264 779 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 DNAJC6O75061 913 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 EML2O95834 649 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 ATP1A1P05023 1023 aaKnown RBP12.13□□□□□ -0.47
SNHG4-208ENST00000514110 ITGB2P05107 769 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 HLA-DQB2P05538 268 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 CES1P23141 567 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 CD82P27701 267 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 EPHB1P54762 984 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 UBASH3AP57075 661 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 CYP4F2P78329 520 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 SLC10A2Q12908 348 aaPredicted RBP12.13□□□□□ -0.47
SNHG4-208ENST00000514110 SQSTM1Q13501 440 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 PEX6Q13608 980 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 TMEM164Q5U3C3 297 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 TIGD7Q6NT04 549 aaPredicted RBP12.13□□□□□ -0.47
SNHG4-208ENST00000514110 GALNT13Q8IUC8 556 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 NRSN1Q8IZ57 195 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 PQLC3Q8N755 202 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 KCTD6Q8NC69 237 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 OR4D9Q8NGE8 314 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 SLC37A2Q8TED4 501 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 HTR3CQ8WXA8 447 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 TSGA13Q96PP4 275 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 WDR24Q96S15 920 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 ZNF670Q9BS34 389 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 KCNK4Q9NYG8 393 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 CNOT6Q9ULM6 557 aaKnown RBP12.13□□□□□ -0.47
SNHG4-208ENST00000514110 LUC7L2Q9Y383 392 aaKnown RBP12.13□□□□□ -0.47
SNHG4-208ENST00000514110 PRKAB1Q9Y478 270 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 PCDHB11Q9Y5F2 797 aa12.13□□□□□ -0.47
SNHG4-208ENST00000514110 OAS3Q9Y6K5 1087 aaKnown RBP12.13□□□□□ -0.47
SNHG4-208ENST00000514110 SYCE3A1L190 88 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.12□□□□□ -0.47
SNHG4-208ENST00000514110 SLC28A2O43868 658 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 PROSCO94903 275 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 ASMTLO95671 621 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 GYPCP04921 128 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 PYGLP06737 847 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 MMP2P08253 660 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 THRAP10827 490 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 FASLGP48023 281 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 GBE1Q04446 702 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 NFATC3Q12968 1075 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 TRA2AQ13595 282 aaKnown RBP eCLIP12.12□□□□□ -0.47
SNHG4-208ENST00000514110 TBR1Q16650 682 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 FAM182AQ5T1J6 154 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 LPCAT1Q8NF37 534 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 EXD1Q8NHP7 514 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 FATE1Q969F0 183 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 NKD1Q969G9 470 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 FAF2Q96CS3 445 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 TAAR9Q96RI9 348 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 PACSIN1Q9BY11 444 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 PCDH9Q9HC56 1237 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 OCIAD1Q9NX40 245 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 CTTNBP2NLQ9P2B4 639 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 AMACRQ9UHK6 382 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 ZNHIT2Q9UHR6 403 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 SDK2Q58EX2 2172 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 AHCTF1Q8WYP5 2266 aa12.12□□□□□ -0.47
SNHG4-208ENST00000514110 C1orf232A0A0U1RR37 186 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 FADS2P1A8MWK0 482 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 STMND1H3BQB6 276 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 FAM87AP0C7U9 286 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 ITGB6P18564 788 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 CASP14P31944 242 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 RPL26P61254 145 aaKnown RBP12.11□□□□□ -0.47
SNHG4-208ENST00000514110 TPM4P67936 248 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 LRP8Q14114 963 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 PDK2Q15119 407 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 QPCTQ16769 361 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.11□□□□□ -0.47
SNHG4-208ENST00000514110 HENMT1Q5T8I9 393 aaKnown RBP12.11□□□□□ -0.47
SNHG4-208ENST00000514110 TMEM71Q6P5X7 295 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms