RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 PKMP14618 531 aaKnown RBP14.88□□□□□ -0.03
VCAN-211ENST00000513984 WEE1P30291 646 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 HNF1BP35680 557 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 PTGER3P43115 390 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 ECT2LQ008S8 904 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 CTSL3PQ5NE16 218 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 VWA5B1Q5TIE3 1220 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 ADGRD2Q7Z7M1 963 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 ADIPOR2Q86V24 386 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 RYBPQ8N488 228 aaPredicted RBP14.88□□□□□ -0.03
VCAN-211ENST00000513984 CCNYL1Q8N7R7 359 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 GRIN3AQ8TCU5 1115 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 MAPK15Q8TD08 544 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 TBC1D10AQ9BXI6 508 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 DERL2Q9GZP9 239 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 TFB2MQ9H5Q4 396 aaKnown RBP14.88□□□□□ -0.03
VCAN-211ENST00000513984 VTI1BQ9UEU0 232 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 ZDHHC2Q9UIJ5 367 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 PPIL1Q9Y3C6 166 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 MRPS23Q9Y3D9 190 aaKnown RBP14.88□□□□□ -0.03
VCAN-211ENST00000513984 WNT6Q9Y6F9 365 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 SLC30A1Q9Y6M5 507 aa14.88□□□□□ -0.03
VCAN-211ENST00000513984 DIAPH2O60879 1101 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 PYGLP06737 847 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 ESRRAP11474 423 aaPredicted RBP14.87□□□□□ -0.03
VCAN-211ENST00000513984 AOC1P19801 751 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 KCNC1P48547 511 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 CCNHP51946 323 aaPredicted RBP14.87□□□□□ -0.03
VCAN-211ENST00000513984 GALNT1Q10472 559 aaPredicted RBP14.87□□□□□ -0.03
VCAN-211ENST00000513984 CARD16Q5EG05 197 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 SEL1L3Q68CR1 1132 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 CERS6Q6ZMG9 384 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 RBM23Q86U06 439 aaKnown RBP14.87□□□□□ -0.03
VCAN-211ENST00000513984 AHI1Q8N157 1196 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.87□□□□□ -0.03
VCAN-211ENST00000513984 L3HYPDHQ96EM0 354 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 CYP4F12Q9HCS2 524 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 H3BMM5 538 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 GRID2O43424 1007 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 OR1I1O60431 355 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 VPS26AO75436 327 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 POP4O95707 220 aaKnown RBP14.87□□□□□ -0.03
VCAN-211ENST00000513984 ESR1P03372 595 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 SP100P23497 879 aaPredicted RBP14.87□□□□□ -0.03
VCAN-211ENST00000513984 RIPK1Q13546 671 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 CBX2Q14781 532 aaPredicted RBP14.87□□□□□ -0.03
VCAN-211ENST00000513984 SLC9B1Q4ZJI4 515 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 PAQR3Q6TCH7 311 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 FRMD7Q6ZUT3 714 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 PARP9Q8IXQ6 854 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 PLPP6Q8IY26 295 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 CBARPQ8N350 705 aaPredicted RBP14.87□□□□□ -0.03
VCAN-211ENST00000513984 CELF5Q8N6W0 485 aaKnown RBP14.87□□□□□ -0.03
VCAN-211ENST00000513984 KDM1BQ8NB78 822 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 ITFG1Q8TB96 612 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 AGR3Q8TD06 166 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 SMG7Q92540 1137 aaKnown RBP14.87□□□□□ -0.03
VCAN-211ENST00000513984 KCNJ9Q92806 393 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 KIAA1191Q96A73 305 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 ZNF641Q96N77 438 aaPredicted RBP14.87□□□□□ -0.03
VCAN-211ENST00000513984 ATOH8Q96SQ7 321 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 GPR21Q99679 349 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 BTBD10Q9BSF8 475 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 P2RY12Q9H244 342 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 SUV39H2Q9H5I1 410 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 FBXO10Q9UK96 956 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 APPL1Q9UKG1 709 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 FAM50BQ9Y247 325 aa14.87□□□□□ -0.03
VCAN-211ENST00000513984 FNDC3AQ9Y2H6 1198 aaKnown RBP14.87□□□□□ -0.03
VCAN-211ENST00000513984 KIAA1549LQ6ZVL6 1849 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 TRBV5-4A0A0C4DH59 114 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 PRR5-ARHGAP8B1AHC4 643 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 WASH3PC4AMC7 463 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 CLDN7O95471 211 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 PRAMEF1O95521 474 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 IMPDH1P20839 514 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 ATP6V0D1P61421 351 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 ARHGAP8P85298 464 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 RAD51Q06609 339 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 UBAP2LQ14157 1087 aaKnown RBP14.86□□□□□ -0.03
VCAN-211ENST00000513984 OR4D1Q15615 310 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 METTL21CQ5VZV1 264 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 TMEM215Q68D42 235 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 DPY19L3Q6ZPD9 716 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 TAS2R42Q7RTR8 314 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 SNX20Q7Z614 316 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 NKAPQ8N5F7 415 aaKnown RBP14.86□□□□□ -0.03
VCAN-211ENST00000513984 PAF1Q8N7H5 531 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 FAM136AQ96C01 138 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 SCRN2Q96FV2 425 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 MCCC1Q96RQ3 725 aaPredicted RBP14.86□□□□□ -0.03
VCAN-211ENST00000513984 MIPEPQ99797 713 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 TRMOQ9BU70 441 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 PIDD1Q9HB75 910 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 TAGLN3Q9UI15 199 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 SLCO3A1Q9UIG8 710 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 PCDHB1Q9Y5F3 818 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 PLXNA2O75051 1894 aa14.86□□□□□ -0.03
VCAN-211ENST00000513984 A0A1W2PQ67 120 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 NPIPB15A6NHN6 443 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms