RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 C2orf81A6NN90 581 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 GOLGA8KD6RF30 607 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 GOLGA8TH3BQL2 631 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 MTX2O75431 263 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 CRTAMO95727 393 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 LMNAP02545 664 aaKnown RBP11.27□□□□□ -0.61
HTT-213ENST00000513806 THEGLP0DJG4 465 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 ADRA1DP25100 572 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 MC4RP32245 332 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 SPAM1P38567 509 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 MAGEA3P43357 314 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 POLD2P49005 469 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 NPY2RP49146 381 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 CARSP49589 748 aaKnown RBP11.27□□□□□ -0.61
HTT-213ENST00000513806 SARNPP82979 210 aaKnown RBP11.27□□□□□ -0.61
HTT-213ENST00000513806 XIAPP98170 497 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 CDK16Q00536 496 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 AGERQ15109 404 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 KIF19Q2TAC6 998 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 ATP13A5Q4VNC0 1218 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 KHDC1Q4VXA5 237 aaKnown RBP11.27□□□□□ -0.61
HTT-213ENST00000513806 TRIM61Q5EBN2 209 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 SPDYCQ5MJ68 293 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 UBAP2Q5T6F2 1119 aaKnown RBP11.27□□□□□ -0.61
HTT-213ENST00000513806 HOOK3Q86VS8 718 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 CCDC25Q86WR0 208 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 HEATR4Q86WZ0 1026 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 SPATS2Q86XZ4 545 aaKnown RBP11.27□□□□□ -0.61
HTT-213ENST00000513806 UNC5BQ8IZJ1 945 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 ASB12Q8WXK4 309 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 ART4Q93070 314 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 CFAP36Q96G28 342 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 APOOQ9BUR5 198 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 IL26Q9NPH9 171 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 MRPL40Q9NQ50 206 aaKnown RBP11.27□□□□□ -0.61
HTT-213ENST00000513806 RXFP3Q9NSD7 469 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 NLE1Q9NVX2 485 aaPredicted RBP11.27□□□□□ -0.61
HTT-213ENST00000513806 CNOT6Q9ULM6 557 aaKnown RBP11.27□□□□□ -0.61
HTT-213ENST00000513806 CHMP2BQ9UQN3 213 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 DMTF1Q9Y222 760 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 TMEM98Q9Y2Y6 226 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 PCYT1BQ9Y5K3 369 aaPredicted RBP11.27□□□□□ -0.61
HTT-213ENST00000513806 SNX11Q9Y5W9 270 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 MAD1L1Q9Y6D9 718 aa11.27□□□□□ -0.61
HTT-213ENST00000513806 OAS3Q9Y6K5 1087 aaKnown RBP11.27□□□□□ -0.61
HTT-213ENST00000513806 CABIN1Q9Y6J0 2220 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 GLYATL1P3A0A0U1RQE8 302 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 HEATR9A2RTY3 570 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 TMEM202A6NGA9 273 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 SDR42E2A6NKP2 422 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 A6NNZ2 444 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 SLU7O95391 586 aaKnown RBP11.26□□□□□ -0.61
HTT-213ENST00000513806 ELK3P41970 407 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 PFN3P60673 137 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 RACK1P63244 317 aaKnown RBP11.26□□□□□ -0.61
HTT-213ENST00000513806 IRX4P78413 519 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 CDK3Q00526 305 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 IL9RQ01113 521 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 PDIA2Q13087 525 aaKnown RBP11.26□□□□□ -0.61
HTT-213ENST00000513806 CALCOCO2Q13137 446 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 SEMA3AQ14563 771 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 NAA30Q147X3 362 aaPredicted RBP11.26□□□□□ -0.61
HTT-213ENST00000513806 PCID2Q5JVF3 399 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 PEAR1Q5VY43 1037 aaPredicted RBP11.26□□□□□ -0.61
HTT-213ENST00000513806 PSAPL1Q6NUJ1 521 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 KYAT3Q6YP21 454 aaKnown RBP11.26□□□□□ -0.61
HTT-213ENST00000513806 CAPN12Q6ZSI9 719 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 MARK2Q7KZI7 788 aaKnown RBP11.26□□□□□ -0.61
HTT-213ENST00000513806 ABI3BPQ7Z7G0 1075 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 LDB1Q86U70 411 aaPredicted RBP11.26□□□□□ -0.61
HTT-213ENST00000513806 NRSN1Q8IZ57 195 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 DENND6BQ8NEG7 585 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 STYXQ8WUJ0 223 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 HDAC10Q969S8 669 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 ZNF669Q96BR6 464 aaPredicted RBP11.26□□□□□ -0.61
HTT-213ENST00000513806 KLHDC7BQ96G42 594 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 CDKN2AIPNLQ96HQ2 116 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 RANBP9Q96S59 729 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 C1QTNF7Q9BXJ2 289 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 IL22Q9GZX6 179 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 IRF2BPLQ9H1B7 796 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 TCEAL2Q9H3H9 227 aaPredicted RBP11.26□□□□□ -0.61
HTT-213ENST00000513806 IL21RQ9HBE5 538 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 PLAC1Q9HBJ0 212 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 XAB2Q9HCS7 855 aaKnown RBP11.26□□□□□ -0.61
HTT-213ENST00000513806 ZDHHC18Q9NUE0 388 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 NCDNQ9UBB6 729 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 MOSPD1Q9UJG1 213 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 GMEB2Q9UKD1 530 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 SOX13Q9UN79 622 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 ANKRD6Q9Y2G4 727 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 HS3ST3A1Q9Y663 406 aa11.26□□□□□ -0.61
HTT-213ENST00000513806 ZFHX2Q9C0A1 2572 aaPredicted RBP11.26□□□□□ -0.61
HTT-213ENST00000513806 ARHGEF17Q96PE2 2063 aaPredicted RBP11.26□□□□□ -0.61
HTT-213ENST00000513806 TLR4O00206 839 aa11.25□□□□□ -0.61
HTT-213ENST00000513806 SRP72O76094 671 aaKnown RBP11.25□□□□□ -0.61
HTT-213ENST00000513806 PRAMEF1O95521 474 aa11.25□□□□□ -0.61
HTT-213ENST00000513806 GOT2P00505 430 aaKnown RBP11.25□□□□□ -0.61
HTT-213ENST00000513806 FUCA1P04066 466 aa11.25□□□□□ -0.61
HTT-213ENST00000513806 RETP07949 1114 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms