RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 IQCHQ86VS3 1027 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 GATAD2AQ86YP4 633 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 SCN4BQ8IWT1 228 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 DAW1Q8N136 415 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 ARL14Q8N4G2 192 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 CLRN3Q8NCR9 226 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 TMEM161BQ8NDZ6 487 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 OR2T3Q8NH03 318 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 DDB2Q92466 427 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 GOLGA1Q92805 767 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 RPL36ALQ969Q0 106 aaKnown RBP3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 SGF29Q96ES7 293 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 VCPIP1Q96JH7 1222 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 ZNF560Q96MR9 790 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 BBS2Q9BXC9 721 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 SLC2A11Q9BYW1 496 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 TRIM4Q9C037 500 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 ADNPQ9H2P0 1102 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 C6orf106Q9H6K1 298 aaPredicted RBP3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 USP29Q9HBJ7 922 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 POLD4Q9HCU8 107 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 CD93Q9NPY3 652 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 GDF3Q9NR23 364 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 DNAJC17Q9NVM6 304 aaKnown RBP3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 GEMIN8Q9NWZ8 242 aaKnown RBP3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 DDX43Q9NXZ2 648 aaKnown RBP3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 KCND2Q9NZV8 630 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 LARSQ9P2J5 1176 aaKnown RBP3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 KLHL42Q9P2K6 505 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 PLEKHB1Q9UF11 243 aaPredicted RBP3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 KCNE5Q9UJ90 142 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 ANAPC2Q9UJX6 822 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 KCNJ14Q9UNX9 436 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 NCKAP1Q9Y2A7 1128 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 RAD54BQ9Y620 910 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 LRBAP50851 2863 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 ICE1Q9Y2F5 2266 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 CKAP5Q14008 2032 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 MYH11P35749 1972 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 FAM92AA1XBS5 289 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 CDRT15L2A8MXV6 281 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 C10orf142B7Z368 130 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 TLR4O00206 839 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 SLC16A4O15374 487 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 IL18RAPO95256 599 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 DNTTP04053 509 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 ZDHHC11BP0C7U3 371 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 CKMT1AP12532 417 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 MTHFD2P13995 350 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 RPS6KB1P23443 525 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 YWHAQP27348 245 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 CHKAP35790 457 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 KRT2P35908 639 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 NUDT1P36639 197 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 FOLR3P41439 243 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 CDKN1CP49918 316 aaPredicted RBP3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 CCR5P51681 352 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 CLDN6P56747 220 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 GOLGA8FQ08AF8 430 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 GOLGA8DPQ0D2H9 430 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 SLC10A2Q12908 348 aaPredicted RBP3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 TAF10Q12962 218 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 RAPGEF1Q13905 1077 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 ISXQ2M1V0 245 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 MTX3Q5HYI7 312 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 EARS2Q5JPH6 523 aaKnown RBP3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 KCNT1Q5JUK3 1230 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 FCRLBQ6BAA4 426 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 RINT1Q6NUQ1 792 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 TICAM1Q8IUC6 712 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 BBS7Q8IWZ6 715 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 NUP93Q8N1F7 819 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 PDCL2Q8N4E4 241 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 LRRC52Q8N7C0 313 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 MYCBPAPQ8TBZ2 947 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 SNX19Q92543 992 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 RAX2Q96IS3 184 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 MSTO1Q9BUK6 570 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 RAB34Q9BZG1 259 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 REXO4Q9GZR2 422 aaKnown RBP3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 ABCG4Q9H172 646 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 ELOVL2Q9NXB9 296 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 IL37Q9NZH6 218 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 NCKIPSDQ9NZQ3 722 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 FAM30AQ9NZY2 134 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 SUN2Q9UH99 717 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 CHORDC1Q9UHD1 332 aaPredicted RBP3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 TUBD1Q9UJT1 453 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 CDH9Q9ULB4 789 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 L1RE1Q9UN81 338 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 ZNF510Q9Y2H8 683 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 PCDHB1Q9Y5F3 818 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 SNX14Q9Y5W7 946 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 BOD1L1Q8NFC6 3051 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 BSNQ9UPA5 3926 aa3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 TP53BP1Q12888 1972 aaPredicted RBP3.8□□□□□ -1.8
PDLIM5-218ENST00000513341 NBASA2RRP1 2371 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 A0A1W2PR77 199 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 NEMP2A6NFY4 417 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 LRRC72A6NJI9 287 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms