RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 CHSY3Q70JA7 882 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 THAP5Q7Z6K1 395 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 PEG10Q86TG7 708 aaKnown RBP12.44□□□□□ -0.42
COL11A1-210ENST00000512756 OR4K2Q8NGD2 314 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 OR4A15Q8NGL6 344 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 TWIST2Q8WVJ9 160 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 CORO1BQ9BR76 489 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 CHID1Q9BWS9 393 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 OXCT2Q9BYC2 517 aaPredicted RBP12.44□□□□□ -0.42
COL11A1-210ENST00000512756 SLC25A51Q9H1U9 297 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 ARHGEF4Q9NR80 690 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 NUDT4Q9NZJ9 180 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 ATXN10Q9UBB4 475 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 NPEPPSL1A6NEC2 478 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 LRATO95237 230 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 GNRH1P01148 92 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 HLA-DQA2P01906 255 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 KIR3DL1P43629 444 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 FASTKD3Q14CZ7 662 aaKnown RBP12.44□□□□□ -0.42
COL11A1-210ENST00000512756 PYDC2Q56P42 97 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 CAPN13Q6MZZ7 669 aaPredicted RBP12.44□□□□□ -0.42
COL11A1-210ENST00000512756 OTOP3Q7RTS5 596 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 LPGAT1Q92604 370 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 TRIT1Q9H3H1 467 aaKnown RBP12.44□□□□□ -0.42
COL11A1-210ENST00000512756 IFT80Q9P2H3 777 aaPredicted RBP12.44□□□□□ -0.42
COL11A1-210ENST00000512756 MBD2Q9UBB5 411 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 A0A1W2PQH9 124 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 SLURP2P0DP57 97 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 TAF13Q15543 124 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 PHC3Q8NDX5 983 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 DENND2DQ9H6A0 471 aaPredicted RBP12.44□□□□□ -0.42
COL11A1-210ENST00000512756 DNAJC11Q9NVH1 559 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 OGDHLQ9ULD0 1010 aa12.44□□□□□ -0.42
COL11A1-210ENST00000512756 ZNF490Q9ULM2 529 aaPredicted RBP12.44□□□□□ -0.42
COL11A1-210ENST00000512756 WWP2O00308 870 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 CDH3P22223 829 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 MAPKAPK2P49137 400 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 FKBP1BP68106 108 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 DMPKQ09013 629 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 LCP2Q13094 533 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 ANKRD22Q5VYY1 191 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 ANKS1BQ7Z6G8 1248 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 ROPN1LQ96C74 230 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 HNRNPABQ99729 332 aaKnown RBP12.43□□□□□ -0.42
COL11A1-210ENST00000512756 PDZD7Q9H5P4 517 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 ASF1AQ9Y294 204 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 MRPS23Q9Y3D9 190 aaKnown RBP12.43□□□□□ -0.42
COL11A1-210ENST00000512756 CHURC1-FNTBB4DL54 471 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 PLK4O00444 970 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 TRBC1P01850 177 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 CCT3P49368 545 aaKnown RBP12.43□□□□□ -0.42
COL11A1-210ENST00000512756 LIN52Q52LA3 116 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 CACUL1Q86Y37 369 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 SPPL2CQ8IUH8 684 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 NETO2Q8NC67 525 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 GIPC3Q8TF64 312 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 CAPSLQ8WWF8 208 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 SLC9A7Q96T83 725 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 CIB1Q99828 191 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 TTPALQ9BTX7 342 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 C3orf14Q9HBI5 128 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 GRHL1Q9NZI5 618 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 E9PAM4 449 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 STK16O75716 305 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 FGBP02675 491 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 MMP3P08254 477 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 BNC1Q01954 994 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 MED22Q15528 200 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 ALG11Q2TAA5 492 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 IRAK1BP1Q5VVH5 260 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 RHBDF2Q6PJF5 856 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 PIGWQ7Z7B1 504 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 RNF208Q9H0X6 261 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 SMPD3Q9NY59 655 aaPredicted RBP12.43□□□□□ -0.42
COL11A1-210ENST00000512756 COQ4Q9Y3A0 265 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 PLIN4Q96Q06 1357 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 GLYATL1P3A0A0U1RQE8 302 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 C2CD4BA6NLJ0 364 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 A8MUI8 341 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 MATN3O15232 486 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 SLC22A2O15244 555 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 OR10H2O60403 315 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 ERAL1O75616 437 aaKnown RBP12.43□□□□□ -0.42
COL11A1-210ENST00000512756 CHRNB2P17787 502 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 CACNG1Q06432 222 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 LIN54Q6MZP7 749 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 LBX2Q6XYB7 198 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 LRRC17Q8N6Y2 441 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 BEND7Q8N7W2 519 aaPredicted RBP12.43□□□□□ -0.42
COL11A1-210ENST00000512756 MCFD2Q8NI22 146 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 HM13Q8TCT9 377 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 DQX1Q8TE96 717 aaKnown RBP12.43□□□□□ -0.42
COL11A1-210ENST00000512756 AASDHPPTQ9NRN7 309 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 TRPS1Q9UHF7 1281 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 SLC27A6Q9Y2P4 619 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 MRPS7Q9Y2R9 242 aaKnown RBP12.43□□□□□ -0.42
COL11A1-210ENST00000512756 OR10H1Q9Y4A9 318 aa12.43□□□□□ -0.42
COL11A1-210ENST00000512756 NPHS1O60500 1241 aa12.42□□□□□ -0.42
COL11A1-210ENST00000512756 LYNP07948 512 aa12.42□□□□□ -0.42
COL11A1-210ENST00000512756 PRKAR1AP10644 381 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms