RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 LCMT1Q9UIC8 334 aa14.5□□□□□ -0.09
LETM1-207ENST00000512669 PHTF1Q9UMS5 762 aa14.5□□□□□ -0.09
LETM1-207ENST00000512669 BOD1L1Q8NFC6 3051 aa14.5□□□□□ -0.09
LETM1-207ENST00000512669 ANKRD36A6QL64 1941 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 A0A1W2PQ67 120 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 B4DGG1 531 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 C9orf172C9J069 976 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 FUCA1P04066 466 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 NTRK1P04629 796 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 HLA-DQB2P05538 268 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 MMP2P08253 660 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 CCNB1P14635 433 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 TRA2AQ13595 282 aaKnown RBP eCLIP14.49□□□□□ -0.09
LETM1-207ENST00000512669 ACOX1Q15067 660 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 ARMC12Q5T9G4 340 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 SLC9A4Q6AI14 798 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 NPNTQ6UXI9 565 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 TECPR1Q7Z6L1 1165 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 VASH2Q86V25 355 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 MAP7D3Q8IWC1 876 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 RHOT2Q8IXI1 618 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 BBS5Q8N3I7 341 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.49□□□□□ -0.09
LETM1-207ENST00000512669 NSMCE1Q8WV22 266 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 PTCD2Q8WV60 388 aaKnown RBP14.49□□□□□ -0.09
LETM1-207ENST00000512669 HDAC11Q96DB2 347 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 DPYSL5Q9BPU6 564 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 TRIM5Q9C035 493 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 WDR26Q9H7D7 661 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 FGF22Q9HCT0 170 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 TUBD1Q9UJT1 453 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 INTUQ9ULD6 942 aa14.49□□□□□ -0.09
LETM1-207ENST00000512669 ARHGEF17Q96PE2 2063 aaPredicted RBP14.49□□□□□ -0.09
LETM1-207ENST00000512669 DOPEY2Q9Y3R5 2298 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 LRRD1A4D1F6 860 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 ZNF487B1APH4 448 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 LCA5LO95447 670 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 COMTP21964 271 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 ETV5P41161 510 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 ETV3P41162 512 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 SRSF1Q07955 248 aaKnown RBP eCLIP14.48□□□□□ -0.09
LETM1-207ENST00000512669 ITKQ08881 620 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 SRSF6Q13247 344 aaKnown RBP14.48□□□□□ -0.09
LETM1-207ENST00000512669 NR1D2Q14995 579 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 LRRC38Q5VT99 294 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 DENND2CQ68D51 928 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 TIGD7Q6NT04 549 aaPredicted RBP14.48□□□□□ -0.09
LETM1-207ENST00000512669 BORAQ6PGQ7 559 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 Q6ZVL8 140 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 B4GALNT4Q76KP1 1039 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 ZNF438Q7Z4V0 828 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 GAS2L3Q86XJ1 694 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 SFTPA2Q8IWL1 248 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 PAF1Q8N7H5 531 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 RNF25Q96BH1 459 aaPredicted RBP14.48□□□□□ -0.09
LETM1-207ENST00000512669 DTD2Q96FN9 168 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 TAAR9Q96RI9 348 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 GSDMCQ9BYG8 508 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 POLR1EQ9GZS1 481 aaKnown RBP14.48□□□□□ -0.09
LETM1-207ENST00000512669 GOLPH3Q9H4A6 298 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 CHKBQ9Y259 395 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 PCDHGA3Q9Y5H0 932 aa14.48□□□□□ -0.09
LETM1-207ENST00000512669 PRSS38A1L453 326 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 RHPN2P1A8MT19 583 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 KCNK1O00180 336 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 CAPN5O15484 640 aaPredicted RBP14.47□□□□□ -0.09
LETM1-207ENST00000512669 SOD1P00441 154 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 JCHAINP01591 159 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 NFKBIAP25963 317 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 MAGEA1P43355 309 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 GPR3P46089 330 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 NFKB2Q00653 900 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 B4GALNT1Q00973 533 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 PTSQ03393 145 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 PPIDQ08752 370 aaKnown RBP14.47□□□□□ -0.09
LETM1-207ENST00000512669 ILF3Q12906 894 aaKnown RBP eCLIP14.47□□□□□ -0.09
LETM1-207ENST00000512669 ZBTB17Q13105 803 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 BIRC2Q13490 618 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 C16orf72Q14CZ0 275 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 TAZQ16635 292 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 MFSD7Q6UXD7 560 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 C17orf82Q86X59 251 aaPredicted RBP14.47□□□□□ -0.09
LETM1-207ENST00000512669 VSIG1Q86XK7 387 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 CCDC13Q8IYE1 715 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 CCL4L1Q8NHW4 92 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 NUS1Q96E22 293 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 CATSPER2Q96P56 530 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 TDRD1Q9BXT4 1180 aaKnown RBP14.47□□□□□ -0.09
LETM1-207ENST00000512669 TEX101Q9BY14 249 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 TMEM168Q9H0V1 697 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 CDH19Q9H159 772 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 SEMA6CQ9H3T2 930 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 CYP4F12Q9HCS2 524 aa14.47□□□□□ -0.09
LETM1-207ENST00000512669 SDK2Q58EX2 2172 aa14.46□□□□□ -0.09
LETM1-207ENST00000512669 A0A0J9YYE9 177 aa14.46□□□□□ -0.09
LETM1-207ENST00000512669 RCCD1A6NED2 376 aa14.46□□□□□ -0.09
LETM1-207ENST00000512669 TRBC1P01850 177 aa14.46□□□□□ -0.09
LETM1-207ENST00000512669 KRT1P04264 644 aa14.46□□□□□ -0.09
LETM1-207ENST00000512669 CEACAM5P06731 702 aa14.46□□□□□ -0.09
LETM1-207ENST00000512669 CYP2A6P11509 494 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms