RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 OR9K2Q8NGE7 335 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 SLC35G2Q8TBE7 412 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 SLC2A14Q8TDB8 520 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 KLHDC7BQ96G42 594 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 TEKT5Q96M29 485 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 SEPHS2Q99611 448 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 YIPF4Q9BSR8 244 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 TMEM9Q9P0T7 183 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 KCNS2Q9ULS6 477 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 MYOM2P54296 1465 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 MAPKBP1O60336 1514 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 A0A1W2PQ45 241 aaPredicted RBP8.91□□□□□ -0.98
VCAN-208ENST00000512590 A0A1W2PQY0 241 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 NPIPA5E9PKD4 350 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 STBD1O95210 358 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 GJB6O95452 261 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 PDYNP01213 254 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 RARAP10276 462 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 SMARCB1Q12824 385 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 SCGB2A2Q13296 93 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 MPPED2Q15777 294 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 ACAD10Q6JQN1 1059 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 SSX6Q7RTT6 188 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 TXNRD3Q86VQ6 643 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 SHC3Q92529 594 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 AIFM2Q9BRQ8 373 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 UGT2B28Q9BY64 529 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 ZYG11BQ9C0D3 744 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 C6orf62Q9GZU0 229 aaPredicted RBP8.91□□□□□ -0.98
VCAN-208ENST00000512590 TMPRSS4Q9NRS4 437 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 KCNK4Q9NYG8 393 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 PCDH10Q9P2E7 1040 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 NPIPA1Q9UND3 350 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 CYP8B1Q9UNU6 501 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 INMTO95050 263 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 CYP21A2P08686 494 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 ALPIP09923 528 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 ARP10275 920 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 TKTP29401 623 aaKnown RBP8.9□□□□□ -0.98
VCAN-208ENST00000512590 POLR2HP52434 150 aaKnown RBP8.9□□□□□ -0.98
VCAN-208ENST00000512590 EEF1A2Q05639 463 aaKnown RBP8.9□□□□□ -0.98
VCAN-208ENST00000512590 ENPEPQ07075 957 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 PDGFRLQ15198 375 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 SDHAF4Q5VUM1 108 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 C12orf56Q8IXR9 622 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 PDPRQ8NCN5 879 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 GPR152Q8TDT2 470 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 NSMCE2Q96MF7 247 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 FZD3Q9NPG1 666 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 SLC22A14Q9Y267 594 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 PCDHGA8Q9Y5G5 932 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 E7ENX8 843 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 TP53I11O14683 189 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 ATP6V1G1O75348 118 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 SCO1O75880 301 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 HOXB2P14652 356 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 NPR3P17342 541 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 CDKN1CP49918 316 aaPredicted RBP8.9□□□□□ -0.98
VCAN-208ENST00000512590 ETF1P62495 437 aaKnown RBP8.9□□□□□ -0.98
VCAN-208ENST00000512590 TAP2Q03519 686 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 ATP1A4Q13733 1029 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 ZNF454Q8N9F8 522 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 TEX19Q8NA77 164 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 SNIP1Q8TAD8 396 aaKnown RBP8.9□□□□□ -0.98
VCAN-208ENST00000512590 MOCOSQ96EN8 888 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 MNTQ99583 582 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 AARSD1Q9BTE6 412 aaKnown RBP8.9□□□□□ -0.98
VCAN-208ENST00000512590 IL20RAQ9UHF4 553 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 ST3GAL5Q9UNP4 418 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 TNS3Q68CZ2 1445 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 LGALS16A8MUM7 142 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 TRIM49D1C9J1S8 452 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 BTN3A3O00478 584 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 DNALI1O14645 258 aaPredicted RBP8.9□□□□□ -0.98
VCAN-208ENST00000512590 KHNYNO15037 678 aaKnown RBP8.9□□□□□ -0.98
VCAN-208ENST00000512590 CDK14O94921 469 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 CFHP08603 1231 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 FAM153BP0C7A2 387 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 CYP11B2P19099 503 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 CRABP2P29373 138 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 CCR3P51677 355 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 KCNA10Q16322 511 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 C9orf152Q5JTZ5 239 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 PDSS2Q86YH6 399 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 ZDHHC17Q8IUH5 632 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 CCDC116Q8IYX3 515 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 UPF1Q92900 1129 aaKnown RBP eCLIP8.9□□□□□ -0.98
VCAN-208ENST00000512590 MYLPFQ96A32 169 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 POPDC2Q9HBU9 364 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 SGK2Q9HBY8 427 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 GPR160Q9UJ42 338 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 ITGB1BP2Q9UKP3 347 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 TRHDEQ9UKU6 1024 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 CFL2Q9Y281 166 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 MTO1Q9Y2Z2 717 aaKnown RBP8.9□□□□□ -0.98
VCAN-208ENST00000512590 IQSEC2Q5JU85 1478 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 UBDO15205 165 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 PRH1P02810 166 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 THRAP10827 490 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 CPN2P22792 545 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms