RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 MAPTP10636 758 aaKnown RBP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 PRKAR1AP10644 381 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 ACHEP22303 614 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 CAPGP40121 348 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 VIPR2P41587 438 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 SPIBQ01892 262 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 ZP2Q05996 745 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 ABHD18Q0P651 414 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 CSTF3Q12996 717 aaKnown RBP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 AIMP2Q13155 320 aaKnown RBP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 PPIGQ13427 754 aaKnown RBP eCLIP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 BCL2A1Q16548 175 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 TJAP1Q5JTD0 557 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 ABLIM2Q6H8Q1 611 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 FOXR2Q6PJQ5 311 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 ABHD15Q6UXT9 468 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 ERASQ7Z444 233 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 CLYBLQ8N0X4 340 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 TTLL6Q8N841 843 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 Q8NA96 180 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 CFAP61Q8NHU2 1237 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 ZCCHC10Q8TBK6 192 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 RNF31Q96EP0 1072 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 HMCESQ96FZ2 354 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 FAM20AQ96MK3 541 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 ZNF416Q9BWM5 594 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 NUDT15Q9NV35 164 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 DNAJB12Q9NXW2 375 aaKnown RBP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 PKD2L2Q9NZM6 624 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 NDUFA13Q9P0J0 144 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 VPS18Q9P253 973 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 FBLN5Q9UBX5 448 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 CPSF1Q10570 1443 aaKnown RBP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 CDC42BPGQ6DT37 1551 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 TOPAZ1Q8N9V7 1692 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 A0A087WZY1 265 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 A0A1W2PR77 199 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 A6NL46 340 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 SLC38A8A6NNN8 435 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 MEIS2O14770 477 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 PER2O15055 1255 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 GUCY1B2O75343 617 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 VPS4BO75351 444 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 VIPP01282 170 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 CYP1A1P04798 512 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 CD1AP06126 327 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 SERPINF2P08697 491 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 CYP19A1P11511 503 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 DRD2P14416 443 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 SDHBP21912 280 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 PTDSS1P48651 473 aaKnown RBP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 ALDH7A1P49419 539 aaKnown RBP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 NAGLUP54802 743 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 MTTPP55157 894 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 SLFN5Q08AF3 891 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 KCNMA1Q12791 1236 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 FHL3Q13643 280 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 MVPQ14764 893 aaKnown RBP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 DLG2Q15700 870 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 VARS2Q5ST30 1063 aaKnown RBP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 MANEALQ5VSG8 457 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 KIAA1841Q6NSI8 718 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 MRNIPQ6NTE8 343 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 DPY19L2P1Q6NXN4 242 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 RHOUQ7L0Q8 258 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 SPATA21Q7Z572 469 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 ZNF410Q86VK4 478 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 BATF2Q8N1L9 274 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 KIFAP3Q92845 792 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 ISG20Q96AZ6 181 aaKnown RBP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 TPD52L3Q96J77 140 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 UPF3BQ9BZI7 483 aaKnown RBP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 MS4A7Q9GZW8 240 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 RAB17Q9H0T7 212 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 S1PR5Q9H228 398 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 WDCPQ9H6R7 721 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 EXO5Q9H790 373 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 CNOT10Q9H9A5 744 aaKnown RBP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 PRMT7Q9NVM4 692 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 BARHL2Q9NY43 387 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 STX18Q9P2W9 335 aaKnown RBP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 PLAGL1Q9UM63 463 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 USP16Q9Y5T5 823 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 U3KQV3 271 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 OR6C75A6NL08 312 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 ANXA2P2A6NMY6 339 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 C22orf46C9J442 243 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 TEX46H3BTG2 121 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 WRBO00258 174 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 HS3ST1O14792 307 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 TMPRSS2O15393 492 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 FOXP2O15409 715 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 SIGLEC6O43699 453 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 TLX3O43711 291 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 TLX2O43763 284 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 ADAM23O75077 832 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 SLC16A8O95907 504 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 CD19P15391 556 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 MYF6P23409 242 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 291.5 ms