RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ATP1A3P13637 1013 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 SEPHS1P49903 392 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 MARSP56192 900 aaKnown RBP9.06□□□□□ -0.96
NUP54-211ENST00000512151 ART3Q13508 389 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 APTXQ7Z2E3 356 aaKnown RBP9.06□□□□□ -0.96
NUP54-211ENST00000512151 CDH24Q86UP0 819 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 FJX1Q86VR8 437 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 NLRP14Q86W24 1093 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 RASGRP3Q8IV61 690 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 ITLN2Q8WWU7 325 aaPredicted RBP9.06□□□□□ -0.96
NUP54-211ENST00000512151 SLC35C1Q96A29 364 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 NT5C1BQ96P26 610 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 TBCBQ99426 244 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 TBC1D10AQ9BXI6 508 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 TEX101Q9BY14 249 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 MAGEB5Q9BZ81 275 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 NAT10Q9H0A0 1025 aaKnown RBP9.06□□□□□ -0.96
NUP54-211ENST00000512151 SUV39H2Q9H5I1 410 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 METTL14Q9HCE5 456 aaKnown RBP9.06□□□□□ -0.96
NUP54-211ENST00000512151 LATS2Q9NRM7 1088 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 OGFRQ9NZT2 677 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 DNAI1Q9UI46 699 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 NEU3Q9UQ49 428 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 B3GNT3Q9Y2A9 372 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 PCDHGA10Q9Y5H3 936 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 MN1Q10571 1320 aaPredicted RBP9.06□□□□□ -0.96
NUP54-211ENST00000512151 SSU72P8A0A1W2PR75 194 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 SMTNL1A8MU46 457 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 A8MX80 341 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 SLC16A3O15427 465 aaKnown RBP9.05□□□□□ -0.96
NUP54-211ENST00000512151 IVLP07476 585 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 PLEKP08567 350 aaPredicted RBP9.05□□□□□ -0.96
NUP54-211ENST00000512151 FGF5P12034 268 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 COX6B1P14854 86 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 SULT1E1P49888 294 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 HDAC4P56524 1084 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 RHOAP61586 193 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 RAD51Q06609 339 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 CYTH1Q15438 398 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 MEA1Q16626 185 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 TPD52L1Q16890 204 aaPredicted RBP9.05□□□□□ -0.96
NUP54-211ENST00000512151 RAB6CQ53S08 254 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 ERAP2Q6P179 960 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 SYVN1Q86TM6 617 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 KCNMB4Q86W47 210 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 HPS6Q86YV9 775 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 CAMK1DQ8IU85 385 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 TRIM59Q8IWR1 403 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 HCAR2Q8TDS4 363 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 FNIP1Q8TF40 1166 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 ZNF606Q8WXB4 792 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 NT5C3BQ969T7 300 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 RNF25Q96BH1 459 aaPredicted RBP9.05□□□□□ -0.96
NUP54-211ENST00000512151 C9orf72Q96LT7 481 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 RAB6CQ9H0N0 254 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 NOL6Q9H6R4 1146 aaKnown RBP9.05□□□□□ -0.96
NUP54-211ENST00000512151 GPR83Q9NYM4 423 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 CNTN6Q9UQ52 1028 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 SLC17A4Q9Y2C5 497 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 PCYT1BQ9Y5K3 369 aaPredicted RBP9.05□□□□□ -0.96
NUP54-211ENST00000512151 KLF2Q9Y5W3 355 aaPredicted RBP9.05□□□□□ -0.96
NUP54-211ENST00000512151 FER1L5A0AVI2 2057 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 PIKFYVEQ9Y2I7 2098 aa9.05□□□□□ -0.96
NUP54-211ENST00000512151 ZNF469Q96JG9 3925 aaPredicted RBP9.05□□□□□ -0.96
NUP54-211ENST00000512151 CFAP69A5D8W1 941 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 PDE2AO00408 941 aaPredicted RBP9.04□□□□□ -0.96
NUP54-211ENST00000512151 BUB1O43683 1085 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 KDELR3O43731 214 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 C9P02748 559 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 ELFN1P0C7U0 828 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 BPIP17213 487 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 LPOP22079 712 aaPredicted RBP9.04□□□□□ -0.96
NUP54-211ENST00000512151 CA5AP35218 305 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 FMO5P49326 533 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 GEMIN4P57678 1058 aaKnown RBP9.04□□□□□ -0.96
NUP54-211ENST00000512151 CDK3Q00526 305 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 HHEXQ03014 270 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 DEUP1Q05D60 604 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 PDAP1Q13442 181 aaKnown RBP9.04□□□□□ -0.96
NUP54-211ENST00000512151 IL11RAQ14626 422 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 CCDC40Q4G0X9 1142 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 TCP11X2Q5H9J9 407 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 MANEALQ5VSG8 457 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 AFMIDQ63HM1 303 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 TRNP1Q6NT89 227 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 PWWP2BQ6NUJ5 590 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 DOK6Q6PKX4 331 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 SLC26A9Q7LBE3 791 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 CUZD1Q86UP6 607 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 CREBRFQ8IUR6 639 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 PASD1Q8IV76 773 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 CBARPQ8N350 705 aaPredicted RBP9.04□□□□□ -0.96
NUP54-211ENST00000512151 GLIS1Q8NBF1 620 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 PGAP3Q96FM1 320 aaPredicted RBP9.04□□□□□ -0.96
NUP54-211ENST00000512151 SCARF2Q96GP6 870 aaPredicted RBP9.04□□□□□ -0.96
NUP54-211ENST00000512151 COQ10AQ96MF6 247 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 OR2M4Q96R27 311 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 TMUB1Q9BVT8 246 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 GPR87Q9BY21 358 aa9.04□□□□□ -0.96
NUP54-211ENST00000512151 PHPT1Q9NRX4 125 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms