RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 CSRP3P50461 194 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 GALK1P51570 392 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 DCDC1P59894 354 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 POU4F1Q01851 419 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 CREB5Q02930 508 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 PLK5Q496M5 336 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 ACCSLQ4AC99 568 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 ZNF805Q5CZA5 627 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 PLA2G2CQ5R387 149 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 LYPLAL1Q5VWZ2 237 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 ZNF470Q6ECI4 717 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 Q6ZVU0 165 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 KDELC2Q7Z4H8 507 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 STRA8Q7Z7C7 330 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 SDCCAG8Q86SQ7 713 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-228ENST00000511676 ZC3HC1Q86WB0 502 aaKnown RBP9.09□□□□□ -0.95
NR1I3-228ENST00000511676 C12orf40Q86WS4 652 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 CAMK1DQ8IU85 385 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 CILP2Q8IUL8 1156 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 CYP4X1Q8N118 509 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 STK40Q8N2I9 435 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 OR4L1Q8NH43 312 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.09□□□□□ -0.95
NR1I3-228ENST00000511676 VOPP1Q96AW1 172 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 TSPAN17Q96FV3 270 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 PPP1R16AQ96I34 528 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 VPS39Q96JC1 886 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 RPL10LQ96L21 214 aaKnown RBP9.09□□□□□ -0.95
NR1I3-228ENST00000511676 ZNF778Q96MU6 729 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 PLEKHG4BQ96PX9 1271 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 TTC1Q99614 292 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 TRIM56Q9BRZ2 755 aaKnown RBP9.09□□□□□ -0.95
NR1I3-228ENST00000511676 CAPS2Q9BXY5 557 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 TNKS2Q9H2K2 1166 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 PARD6AQ9NPB6 346 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 INTS9Q9NV88 658 aaKnown RBP9.09□□□□□ -0.95
NR1I3-228ENST00000511676 KCTD5Q9NXV2 234 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 THAP10Q9P2Z0 257 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-228ENST00000511676 IL36AQ9UHA7 158 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 SLCO3A1Q9UIG8 710 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 ANKRD6Q9Y2G4 727 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 ZNF711Q9Y462 761 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 PSAT1Q9Y617 370 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 WASF2Q9Y6W5 498 aa9.09□□□□□ -0.95
NR1I3-228ENST00000511676 HMX2A2RU54 273 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 OTOL1A6NHN0 477 aaPredicted RBP9.08□□□□□ -0.96
NR1I3-228ENST00000511676 GOLGA8CPA6NN73 597 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 UPK3BL1B0FP48 263 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 UPK3BL2E5RIL1 263 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 GLRA3O75311 464 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 GJB3O75712 270 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 KCNK5O95279 499 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 APOA4P06727 396 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 PROS1P07225 676 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 GNSP15586 552 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 ITGB7P26010 798 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 CRABP2P29373 138 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 PMLP29590 882 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 CRHR1P34998 444 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 SLC1A2P43004 574 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 TTPAP49638 278 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 KPNA2P52292 529 aaKnown RBP9.08□□□□□ -0.96
NR1I3-228ENST00000511676 STC1P52823 247 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 IL9RQ01113 521 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 CCDC15Q0P6D6 951 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 ZKSCAN8Q15776 578 aaPredicted RBP9.08□□□□□ -0.96
NR1I3-228ENST00000511676 CDKN3Q16667 212 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 GPR33Q49SQ1 333 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 FNDC3BQ53EP0 1204 aaKnown RBP9.08□□□□□ -0.96
NR1I3-228ENST00000511676 FAM182AQ5T1J6 154 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 FSTL4Q6MZW2 842 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 CES3Q6UWW8 571 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 KYAT3Q6YP21 454 aaKnown RBP9.08□□□□□ -0.96
NR1I3-228ENST00000511676 RGS9BPQ6ZS82 235 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 CYP2U1Q7Z449 544 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 NAT16Q8N8M0 369 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 MDGA1Q8NFP4 955 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 RAB3IL1Q8TBN0 382 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 GRIN3AQ8TCU5 1115 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 DENND1AQ8TEH3 1009 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 OR8D1Q8WZ84 308 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 HDAC10Q969S8 669 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 RAB7BQ96AH8 199 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 CDKN2AIPNLQ96HQ2 116 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 ZFYVE19Q96K21 471 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 DNAJC1Q96KC8 554 aaKnown RBP9.08□□□□□ -0.96
NR1I3-228ENST00000511676 EDEM2Q9BV94 578 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 GPR63Q9BZJ6 419 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 IQCGQ9H095 443 aaKnown RBP9.08□□□□□ -0.96
NR1I3-228ENST00000511676 ZDHHC6Q9H6R6 413 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 ZFYVE1Q9HBF4 777 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 IARS2Q9NSE4 1012 aaKnown RBP9.08□□□□□ -0.96
NR1I3-228ENST00000511676 CATSPERZQ9NTU4 200 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 SLC2A6Q9UGQ3 507 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 SUSD2Q9UGT4 822 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 DCDC2Q9UHG0 476 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 GGT7Q9UJ14 662 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 MID2Q9UJV3 735 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 GRID1Q9ULK0 1009 aa9.08□□□□□ -0.96
NR1I3-228ENST00000511676 SPO11Q9Y5K1 396 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms