RNA–Protein interactions for RNA: ENST00000511642.5

CCND3-215, Transcript of cyclin D3, human

TSL 2 BASIC

Gene CCND3, Length 2,394 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-215	ENST00000511642	ASPDH	A6ND91	283 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	INPPL1	O15357	1258 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	TRMU	O75648	421 aa	Known RBP	13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	GNAO1	P09471	354 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	LINC00032	P0C843	101 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	PRR35	P0CG20	571 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	HGF	P14210	728 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	HOXB8	P17481	243 aa	Predicted RBP	13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	LBP	P18428	481 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	OGN	P20774	298 aa	Known RBP	13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	APLP1	P51693	650 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	POLD3	Q15054	466 aa	Predicted RBP	13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	TBCEL	Q5QJ74	424 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	INTS11	Q5TA45	600 aa	Known RBP	13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	KRT80	Q6KB66	452 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	BLOC1S3	Q6QNY0	202 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	ADGRG5	Q8IZF4	528 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	CBR4	Q8N4T8	237 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	TTC9B	Q8N6N2	239 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	PACRGL	Q8N7B6	248 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	FAM47B	Q8NA70	645 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	HM13	Q8TCT9	377 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	CYP2S1	Q96SQ9	504 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	POLR1E	Q9GZS1	481 aa	Known RBP	13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	CATSPERZ	Q9NTU4	200 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	SMOX	Q9NWM0	555 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	RSL24D1	Q9UHA3	163 aa	Known RBP	13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	PCDHA9	Q9Y5H5	950 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	FAM149A	A5PLN7	773 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	TRIM64C	A6NLI5	447 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	ANGPT2	O15123	496 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	PRAMEF11	O60813	436 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	KERA	O60938	352 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	OAZ2	O95190	189 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	DIO3	P55073	304 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	CDH15	P55291	814 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	TUBA4A	P68366	448 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	ECT2L	Q008S8	904 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	TRIP4	Q15650	581 aa	Predicted RBP	13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	PARP15	Q460N3	678 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	COQ5	Q5HYK3	327 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	HS6ST3	Q8IZP7	471 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	TRIML2	Q8N7C3	387 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	ATP6V0D2	Q8N8Y2	350 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	OR4L1	Q8NH43	312 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	BRSK1	Q8TDC3	778 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	GPR152	Q8TDT2	470 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	DIS3L	Q8TF46	1054 aa	Known RBP	13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	KIAA1191	Q96A73	305 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	TUBGCP3	Q96CW5	907 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	LRRC58	Q96CX6	371 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	MYRFL	Q96LU7	910 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	NSMCE3	Q96MG7	304 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	TRIB3	Q96RU7	358 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	FBXO44	Q9H4M3	255 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	PDF	Q9HBH1	243 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	IL37	Q9NZH6	218 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	ACTR3B	Q9P1U1	418 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	GPR45	Q9Y5Y3	372 aa		13.72	□□□□□ -0.21
CCND3-215	ENST00000511642	ARPC2	O15144	300 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	HNRNPR	O43390	633 aa	Known RBP	13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	BMP10	O95393	424 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	STAMBP	O95630	424 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	IGLV3-27	P01718	113 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	RPS17	P08708	135 aa	Known RBP	13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	GFAP	P14136	432 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	EEF1D	P29692	281 aa	Known RBP	13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	CDK9	P50750	372 aa	Known RBP	13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	HPCA	P84074	193 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	CLC	Q05315	142 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	ILF2	Q12905	390 aa	Known RBP	13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	BNIP2	Q12982	314 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	LCP2	Q13094	533 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	GEN1	Q17RS7	908 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	FBXO48	Q5FWF7	155 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	C17orf99	Q6UX52	265 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	MIB1	Q86YT6	1006 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	CMTR2	Q8IYT2	770 aa	Known RBP	13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	GOLM1	Q8NBJ4	401 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	GAB3	Q8WWW8	586 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	TMEM125	Q96AQ2	219 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	TEX37	Q96LM6	180 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	RPRD1A	Q96P16	312 aa	Predicted RBP	13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	CLK4	Q9HAZ1	481 aa	Known RBP	13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	THEG	Q9P2T0	379 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	RIMKLB	Q9ULI2	386 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	AURKC	Q9UQB9	309 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	SQOR	Q9Y6N5	450 aa		13.71	□□□□□ -0.21
CCND3-215	ENST00000511642	FAM92A	A1XBS5	289 aa		13.71	□□□□□ -0.22
CCND3-215	ENST00000511642	ACOX3	O15254	700 aa		13.71	□□□□□ -0.22
CCND3-215	ENST00000511642	TPD52L2	O43399	206 aa	Known RBP	13.71	□□□□□ -0.22
CCND3-215	ENST00000511642	EPO	P01588	193 aa		13.71	□□□□□ -0.22
CCND3-215	ENST00000511642	HMBS	P08397	361 aa		13.71	□□□□□ -0.22
CCND3-215	ENST00000511642	ZNF140	P52738	457 aa	Predicted RBP	13.71	□□□□□ -0.22
CCND3-215	ENST00000511642	FOXM1	Q08050	763 aa		13.71	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms