RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 TRIM68Q6AZZ1 485 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 TMPRSS11AQ6ZMR5 421 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 RGS9BPQ6ZS82 235 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 DEPDC7Q96QD5 511 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 PSMB7Q99436 277 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 ELAC2Q9BQ52 826 aaKnown RBP4.93□□□□□ -1.62
PTPN13-209ENST00000511467 RHOBTB2Q9BYZ6 727 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 NXF3Q9H4D5 531 aaKnown RBP4.93□□□□□ -1.62
PTPN13-209ENST00000511467 FAM105AQ9NUU6 356 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 IGSF9Q9P2J2 1179 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 ABCA1O95477 2261 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 A0A0J9YVX5 310 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 TMEM189-UBE2V1I3L0A0 370 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 KLF11O14901 512 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 LATO43561 262 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 SLC25A12O75746 678 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 LRIG2O94898 1065 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 SLC35G4P0C7Q5 338 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 BMP7P18075 431 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 MAPK3P27361 379 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-209ENST00000511467 RCVRNP35243 200 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 ARL2P36404 184 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 RPL14P50914 215 aaKnown RBP4.93□□□□□ -1.62
PTPN13-209ENST00000511467 ACSM2AQ08AH3 577 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 GALNT3Q14435 633 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 TAF1AQ15573 450 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-209ENST00000511467 PLEKHA7Q6IQ23 1121 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 TTC33Q6PID6 262 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-209ENST00000511467 FAM35AQ86V20 835 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 TNS4Q8IZW8 715 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 RORBQ92753 470 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 KLRG1Q96E93 195 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 FEM1CQ96JP0 617 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 RNF157Q96PX1 679 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 LRMDAQ9H2I8 198 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 GPN3Q9UHW5 284 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-209ENST00000511467 SNCAIPQ9Y6H5 919 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 ARFGEF3Q5TH69 2177 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 RNF103O00237 685 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 CDK2AP1O14519 115 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 TRUB2O95900 331 aaKnown RBP4.93□□□□□ -1.62
PTPN13-209ENST00000511467 NTRK1P04629 796 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 IMPDH2P12268 514 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 SLC6A2P23975 617 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 ALDH4A1P30038 563 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 RPA3P35244 121 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-209ENST00000511467 CDH8P55286 799 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 TAS2R43P59537 309 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 GAD2Q05329 585 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 DGKKQ5KSL6 1271 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 PDSS1Q5T2R2 415 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 LIN54Q6MZP7 749 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 MAMDC4Q6UXC1 1216 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 ABHD13Q7L211 337 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 CXXC5Q7LFL8 322 aaKnown RBP4.93□□□□□ -1.62
PTPN13-209ENST00000511467 CMTR2Q8IYT2 770 aaKnown RBP4.93□□□□□ -1.62
PTPN13-209ENST00000511467 ZSCAN1Q8NBB4 408 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 EPS8L1Q8TE68 723 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 ZFPM2Q8WW38 1151 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 MARK4Q96L34 752 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 CLCC1Q96S66 551 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 CYP2S1Q96SQ9 504 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 COQ7Q99807 217 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 VRK1Q99986 396 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-209ENST00000511467 TIGARQ9NQ88 270 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 OR12D3Q9UGF7 316 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 DDX20Q9UHI6 824 aaKnown RBP4.93□□□□□ -1.62
PTPN13-209ENST00000511467 HEATR5AQ86XA9 2040 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 CYB5AP00167 134 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 ARHGDIBP52566 201 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 GRSF1Q12849 480 aaKnown RBP eCLIP4.93□□□□□ -1.62
PTPN13-209ENST00000511467 SLC29A2Q14542 456 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 ZMYND11Q15326 602 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 KIAA0930Q6ICG6 404 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-209ENST00000511467 IL27RAQ6UWB1 636 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 OLFML1Q6UWY5 402 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 ARHGAP12Q8IWW6 846 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 SYTL1Q8IYJ3 562 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 POF1BQ8WVV4 589 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 C8orf48Q96LL4 319 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 EPHA6Q9UF33 1036 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 AURKCQ9UQB9 309 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 CUL9Q8IWT3 2517 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 ISPDA4D126 451 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 AGPSO00116 658 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 FARP2O94887 1054 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-209ENST00000511467 ASMTLO95671 621 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 GSTT2BP0CG30 244 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 LIG3P49916 1009 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 ATP4BP51164 291 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 NDST1P52848 882 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 CDC42P60953 191 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 EN1Q05925 392 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-209ENST00000511467 CRHR2Q13324 411 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 SNTA1Q13424 505 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 MAMLD1Q13495 774 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 MFSD13AQ14CX5 517 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 DPYSL2Q16555 572 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 ACSM2BQ68CK6 577 aa4.93□□□□□ -1.62
PTPN13-209ENST00000511467 SMYD4Q8IYR2 804 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms