RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, human

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-231	ENST00000510245	HDAC4	P56524	1084 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	PER3	P56645	1201 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	ADAM8	P78325	824 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	HGFAC	Q04756	655 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	DRAP1	Q14919	205 aa	Predicted RBP	7.67	□□□□□ -1.18
CAST-231	ENST00000510245	KYAT1	Q16773	422 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	POM121L1P	Q3SYA9	428 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	C19orf54	Q5BKX5	351 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	CHST15	Q7LFX5	561 aa	Predicted RBP	7.67	□□□□□ -1.18
CAST-231	ENST00000510245	STON2	Q8WXE9	905 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	FBXO32	Q969P5	355 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	MYLPF	Q96A32	169 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	CLPTM1L	Q96KA5	538 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	NT5C1B	Q96P26	610 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	CCDC3	Q9BQI4	270 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	SLC26A6	Q9BXS9	759 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	7.67	□□□□□ -1.18
CAST-231	ENST00000510245	FZD4	Q9ULV1	537 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	L1RE1	Q9UN81	338 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	AKAP9	Q99996	3911 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	MN1	Q10571	1320 aa	Predicted RBP	7.67	□□□□□ -1.18
CAST-231	ENST00000510245	ANAPC1	Q9H1A4	1944 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	TBC1D3D	A0A087WVF3	549 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	TBC1D3I	A0A087WXS9	549 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	TBC1D3E	A0A087X179	549 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	TBC1D3K	A0A087X1G2	549 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	TBC1D3F	A6NER0	549 aa	Predicted RBP	7.66	□□□□□ -1.18
CAST-231	ENST00000510245	TBC1D3L	B9A6J9	549 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245		D6RAR5	112 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245		F8VP50	259 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	CASC3	O15234	703 aa	Known RBP	7.66	□□□□□ -1.18
CAST-231	ENST00000510245	MID1	O15344	667 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	LAT	O43561	262 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	JAK2	O60674	1132 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	PHF2	O75151	1096 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	TBC1D3H	P0C7X1	549 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	YWHAQ	P27348	245 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	MAT2A	P31153	395 aa	Known RBP	7.66	□□□□□ -1.18
CAST-231	ENST00000510245	NUDT1	P36639	197 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	PNPLA4	P41247	253 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	TUB	P50607	506 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	NEK3	P51956	506 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	ADPRH	P54922	357 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	C14orf28	Q4W4Y0	310 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	ZRANB3	Q5FWF4	1079 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	TBC1D3G	Q6DHY5	549 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	TBC1D3C	Q6IPX1	549 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	FAM180A	Q6UWF9	173 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	NPNT	Q6UXI9	565 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	CD302	Q8IX05	232 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	TBC1D3	Q8IZP1	549 aa	Predicted RBP	7.66	□□□□□ -1.18
CAST-231	ENST00000510245	TMEM86A	Q8N2M4	240 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	GLIS1	Q8NBF1	620 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	OR7D4	Q8NG98	312 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	OVCA2	Q8WZ82	227 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	BICD1	Q96G01	975 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	PIWIL1	Q96J94	861 aa	Known RBP	7.66	□□□□□ -1.18
CAST-231	ENST00000510245	GFM1	Q96RP9	751 aa	Known RBP	7.66	□□□□□ -1.18
CAST-231	ENST00000510245	HAPLN3	Q96S86	360 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	RBM15	Q96T37	977 aa	Known RBP eCLIP	7.66	□□□□□ -1.18
CAST-231	ENST00000510245	VRK1	Q99986	396 aa	Predicted RBP	7.66	□□□□□ -1.18
CAST-231	ENST00000510245	CALN1	Q9BXU9	219 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	INTS2	Q9H0H0	1204 aa	Known RBP	7.66	□□□□□ -1.18
CAST-231	ENST00000510245	FAM204A	Q9H8W3	233 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	DPP3	Q9NY33	737 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	RRN3	Q9NYV6	651 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	PPP4R1L	Q9P1A2	415 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	KCND3	Q9UK17	655 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	AJAP1	Q9UKB5	411 aa	Predicted RBP	7.66	□□□□□ -1.18
CAST-231	ENST00000510245	DMTF1	Q9Y222	760 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	PCDHGB6	Q9Y5F9	930 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	PCDHA3	Q9Y5H8	950 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	ESPL1	Q14674	2120 aa		7.66	□□□□□ -1.18
CAST-231	ENST00000510245	CIT	O14578	2027 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	SLC16A4	O15374	487 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	DUX1	O43812	170 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	PENK	P01210	267 aa	Predicted RBP	7.65	□□□□□ -1.18
CAST-231	ENST00000510245	CCKBR	P32239	447 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	ETV5	P41161	510 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	RNASE9	P60153	205 aa	Known RBP	7.65	□□□□□ -1.18
CAST-231	ENST00000510245	HNRNPK	P61978	463 aa	Known RBP eCLIP	7.65	□□□□□ -1.18
CAST-231	ENST00000510245	PSMC1	P62191	440 aa	Known RBP	7.65	□□□□□ -1.18
CAST-231	ENST00000510245	MAPRE1	Q15691	268 aa	Known RBP	7.65	□□□□□ -1.18
CAST-231	ENST00000510245	INPP5J	Q15735	1006 aa	Predicted RBP	7.65	□□□□□ -1.18
CAST-231	ENST00000510245	CST6	Q15828	149 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	DEFB133	Q30KQ1	61 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	CATSPER3	Q86XQ3	398 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	COL27A1	Q8IZC6	1860 aa	Predicted RBP	7.65	□□□□□ -1.18
CAST-231	ENST00000510245	ZNF548	Q8NEK5	533 aa	Predicted RBP	7.65	□□□□□ -1.18
CAST-231	ENST00000510245	OR6B3	Q8NGW1	331 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	CFHR4	Q92496	578 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	PMM1	Q92871	262 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	KIAA1143	Q96AT1	154 aa	Predicted RBP	7.65	□□□□□ -1.18
CAST-231	ENST00000510245	TMEM159	Q96B96	161 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	HDAC11	Q96DB2	347 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	SLC39A13	Q96H72	371 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	SLC45A3	Q96JT2	553 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	PPP1R13B	Q96KQ4	1090 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	MRGPRX4	Q96LA9	322 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	TCEANC2	Q96MN5	208 aa		7.65	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms