RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 PGRMC1O00264 195 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 TPP1O14773 563 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 TP73O15350 636 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 YY2O15391 372 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 PMPCBO75439 489 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 GCATO75600 419 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 HEXIM1O94992 359 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 MT-CO3P00414 261 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 SOD1P00441 154 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 AGTP01019 485 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 TRBC1P01850 177 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 GIMD1P0DJR0 217 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 ETV3P41162 512 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 WNT3AP56704 352 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 INSM1Q01101 510 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 PTPRCAPQ14761 206 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 TRIP13Q15645 432 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 ALG11Q2TAA5 492 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 SIRPB2Q5JXA9 342 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 CCDC181Q5TID7 509 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 ANKRD22Q5VYY1 191 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 RAET1GQ6H3X3 334 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 PNCKQ6P2M8 343 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 CRTC1Q6UUV9 634 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 PID1Q7Z2X4 250 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 EFL1Q7Z2Z2 1120 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 HSD11B1LQ7Z5J1 315 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 TAF8Q7Z7C8 310 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 AGGF1Q8N302 714 aaeCLIP8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 TTC13Q8NBP0 860 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 LRRN4CLQ8ND94 238 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 LPCAT1Q8NF37 534 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 OR56A4Q8NGH8 313 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 IFI44Q8TCB0 444 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 SCRN2Q96FV2 425 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 DDX47Q9H0S4 455 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 ETNK1Q9HBU6 452 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 PCDH9Q9HC56 1237 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 CYP4F12Q9HCS2 524 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 PHPT1Q9NRX4 125 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 KCTD5Q9NXV2 234 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 RSPH14Q9UHP6 348 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 GPR34Q9UPC5 381 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 AKAP13Q12802 2813 aa8.72□□□□□ -1.01
PDLIM5-213ENST00000509357 TDRD6O60522 2096 aaKnown RBP8.71□□□□□ -1.01
PDLIM5-213ENST00000509357 GOLGA4Q13439 2230 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 CTAGE9A4FU28 777 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 TMEM202A6NGA9 273 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 GAPDHSO14556 408 aaPredicted RBP8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 GPR39O43194 453 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 OPA1O60313 960 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 PHF2O75151 1096 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 GP1BAP07359 652 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 CELA2BP08218 269 aaPredicted RBP8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 IVDP26440 423 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 COILP38432 576 aaPredicted RBP8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 GPR1P46091 355 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 KIAA1024LP59773 190 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 PTSQ03393 145 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 AGERQ15109 404 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 SLC14A2Q15849 920 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 C6orf132Q5T0Z8 1188 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 LRRC66Q68CR7 880 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 GUSBP11Q6P575 273 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 RANBP10Q6VN20 620 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 Q6ZVL8 140 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 BZW1Q7L1Q6 419 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 TECPR1Q7Z6L1 1165 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 PROSER1Q86XN7 944 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 TTC30BQ8N4P2 665 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 IPMKQ8NFU5 416 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 PTCD2Q8WV60 388 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 UBE2Q2Q8WVN8 375 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 NAT6Q93015 286 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 NXPE2Q96DL1 559 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 CCDC97Q96F63 343 aaPredicted RBP8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 PDXPQ96GD0 296 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 TBATAQ96M53 351 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 COQ10AQ96MF6 247 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 DEPDC7Q96QD5 511 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 AGAP2Q99490 1192 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 FICDQ9BVA6 458 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 ADGRE3Q9BY15 652 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 CLPBQ9H078 707 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 CARS2Q9HA77 564 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 MRPL40Q9NQ50 206 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 CD84Q9UIB8 345 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 PADI4Q9UM07 663 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 DRG1Q9Y295 367 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 KCTD3Q9Y597 815 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 PCYT1BQ9Y5K3 369 aaPredicted RBP8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 SAR1BQ9Y6B6 198 aa8.71□□□□□ -1.02
PDLIM5-213ENST00000509357 CAPN8A6NHC0 703 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 ANKRD66B4E2M5 251 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 PSMD11O00231 422 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 TNFRSF10CO14798 259 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 TMEM63AO94886 807 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 CLDN7O95471 211 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 IFNB1P01574 187 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 HOXC4P09017 264 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms