RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 MACROD2A1Z1Q3 448 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 APOC4-APOC2K7ER74 178 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 PMPCBO75439 489 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 NDST3O95803 873 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 SOD1P00441 154 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 APOC2P02655 101 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 SLC4A1P02730 911 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 PTMAP06454 111 aaKnown RBP18.54■□□□□ 0.56
UBE3D-207ENST00000509102 ADCY8P40145 1251 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 ABCG1P45844 678 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 POLD2P49005 469 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 MARCKSL1P49006 195 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 C3orf38Q5JPI3 329 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 C19orf48Q6RUI8 117 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 BBS12Q6ZW61 710 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 B4GALNT4Q76KP1 1039 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 MARK2Q7KZI7 788 aaKnown RBP18.54■□□□□ 0.56
UBE3D-207ENST00000509102 LYSMD3Q7Z3D4 306 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 CCNJLQ8IV13 435 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 CCL4L1Q8NHW4 92 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 SNIP1Q8TAD8 396 aaKnown RBP18.54■□□□□ 0.56
UBE3D-207ENST00000509102 HNRNPLLQ8WVV9 542 aaKnown RBP18.54■□□□□ 0.56
UBE3D-207ENST00000509102 HTR3CQ8WXA8 447 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 KRT35Q92764 455 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 HAUS1Q96CS2 278 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 ATXN7L3BQ96GX2 97 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 THSD1Q9NS62 852 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 TAAR2Q9P1P5 351 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 VPS18Q9P253 973 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 FAM153AQ9UHL3 310 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 APPL1Q9UKG1 709 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 TRHDEQ9UKU6 1024 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 TMEM98Q9Y2Y6 226 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 PCDHA3Q9Y5H8 950 aa18.54■□□□□ 0.56
UBE3D-207ENST00000509102 ASXL3Q9C0F0 2248 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 RHPN2P1A8MT19 583 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 H7C0C1 242 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 NTN3O00634 580 aaPredicted RBP18.53■□□□□ 0.56
UBE3D-207ENST00000509102 NOBOXO60393 691 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 STK10O94804 968 aaKnown RBP18.53■□□□□ 0.56
UBE3D-207ENST00000509102 MT-CYBP00156 380 aaPredicted RBP18.53■□□□□ 0.56
UBE3D-207ENST00000509102 CDC25BP30305 580 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 ACTR1BP42025 376 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 ATP5OP48047 213 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 RWDD2BP57060 319 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 PCBP4P57723 403 aaKnown RBP18.53■□□□□ 0.56
UBE3D-207ENST00000509102 ERVPABLB-1P60509 514 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 ACTR1AP61163 376 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 CTBSQ01459 385 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 KIF5AQ12840 1032 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 XRCC4Q13426 336 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 HLTFQ14527 1009 aaKnown RBP eCLIP18.53■□□□□ 0.56
UBE3D-207ENST00000509102 HENMT1Q5T8I9 393 aaKnown RBP18.53■□□□□ 0.56
UBE3D-207ENST00000509102 PID1Q7Z2X4 250 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 TRIM74Q86UV6 250 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 GAS2L3Q86XJ1 694 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 SYCE1Q8N0S2 351 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 ARL14Q8N4G2 192 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 Q8N9G6 341 aaPredicted RBP18.53■□□□□ 0.56
UBE3D-207ENST00000509102 SPATA22Q8NHS9 363 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 WDR36Q8NI36 951 aaKnown RBP18.53■□□□□ 0.56
UBE3D-207ENST00000509102 SCARF2Q96GP6 870 aaPredicted RBP18.53■□□□□ 0.56
UBE3D-207ENST00000509102 COX14Q96I36 57 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 TMEM74Q96NL1 305 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 QKIQ96PU8 341 aaKnown RBP eCLIP18.53■□□□□ 0.56
UBE3D-207ENST00000509102 TRIB3Q96RU7 358 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 AGAP2Q99490 1192 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 ZSCAN5AQ9BUG6 496 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 SPATA16Q9BXB7 569 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 HEMGNQ9BXL5 484 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 LRRN3Q9H3W5 708 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 RMI1Q9H9A7 625 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 ZNHIT2Q9UHR6 403 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 SATB2Q9UPW6 733 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 SHOC2Q9UQ13 582 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 EFR3BQ9Y2G0 817 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 ZNF711Q9Y462 761 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 ENTPD2Q9Y5L3 495 aa18.53■□□□□ 0.56
UBE3D-207ENST00000509102 URB1O60287 2271 aaKnown RBP18.53■□□□□ 0.56
UBE3D-207ENST00000509102 FAM208BQ5VWN6 2430 aa18.52■□□□□ 0.56
UBE3D-207ENST00000509102 CCDC187A0A096LP49 1063 aa18.52■□□□□ 0.56
UBE3D-207ENST00000509102 D6RAR5 112 aa18.52■□□□□ 0.56
UBE3D-207ENST00000509102 ZNF189O75820 626 aaPredicted RBP18.52■□□□□ 0.56
UBE3D-207ENST00000509102 DXOO77932 396 aaKnown RBP18.52■□□□□ 0.56
UBE3D-207ENST00000509102 NFKB1P19838 968 aa18.52■□□□□ 0.56
UBE3D-207ENST00000509102 AK4P27144 223 aaPredicted RBP18.52■□□□□ 0.56
UBE3D-207ENST00000509102 EIF2S3P41091 472 aaKnown RBP18.52■□□□□ 0.56
UBE3D-207ENST00000509102 DCDC1P59894 354 aa18.52■□□□□ 0.56
UBE3D-207ENST00000509102 CCL7P80098 99 aa18.52■□□□□ 0.56
UBE3D-207ENST00000509102 EIF3IQ13347 325 aaKnown RBP18.52■□□□□ 0.56
UBE3D-207ENST00000509102 ZNF569Q5MCW4 686 aa18.52■□□□□ 0.56
UBE3D-207ENST00000509102 PDPK2PQ6A1A2 396 aa18.52■□□□□ 0.56
UBE3D-207ENST00000509102 FOXR1Q6PIV2 292 aa18.52■□□□□ 0.56
UBE3D-207ENST00000509102 RAD9BQ6WBX8 426 aa18.52■□□□□ 0.56
UBE3D-207ENST00000509102 PIP4P2Q8N4L2 257 aa18.52■□□□□ 0.56
UBE3D-207ENST00000509102 UBL4BQ8N7F7 174 aa18.52■□□□□ 0.56
UBE3D-207ENST00000509102 ZNF248Q8NDW4 579 aa18.52■□□□□ 0.56
UBE3D-207ENST00000509102 ACRBPQ8NEB7 543 aa18.52■□□□□ 0.56
UBE3D-207ENST00000509102 SPDYE1Q8NFV5 336 aaPredicted RBP18.52■□□□□ 0.56
UBE3D-207ENST00000509102 TADA1Q96BN2 335 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms