RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 ENPP7Q6UWV6 458 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 FAM72BQ86X60 149 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 CREBRFQ8IUR6 639 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 GOLM1Q8NBJ4 401 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 PCDH19Q8TAB3 1148 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 GDAP1L1Q96MZ0 367 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 RBM15Q96T37 977 aaKnown RBP eCLIP8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 NAA15Q9BXJ9 866 aaKnown RBP8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 MAGEB5Q9BZ81 275 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 RAB6CQ9H0N0 254 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 PDCL3Q9H2J4 239 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 NOL6Q9H6R4 1146 aaKnown RBP8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 EPB41L5Q9HCM4 733 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 GPR34Q9UPC5 381 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 HEMK1Q9Y5R4 338 aaPredicted RBP8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 ANKRD36A6QL64 1941 aa8.66□□□□□ -1.02
COL4A3BP-206ENST00000508809 LRRK2Q5S007 2527 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 A0A1W2PQC6 194 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 TSPAN11A1L157 253 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 CFAP69A5D8W1 941 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 C2CD4BA6NLJ0 364 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 GOLGA8SH3BPF8 625 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 PAX4O43316 350 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 BUB1O43683 1085 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 RAMP2O60895 175 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 TMCC1O94876 653 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 TNFP01375 233 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 PLEKP08567 350 aaPredicted RBP8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 HOXC4P09017 264 aaPredicted RBP8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 JMJD7P0C870 316 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 CD82P27701 267 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 HTR1BP28222 390 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 MTIF2P46199 727 aaKnown RBP8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 SRP54P61011 504 aaKnown RBP8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 ELP6Q0PNE2 266 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 MPP2Q14168 576 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 NFATC4Q14934 902 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 MAN2A1Q16706 1144 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 UGP2Q16851 508 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 LRRC73Q5JTD7 316 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 MIIPQ5JXC2 388 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 CERCAMQ5T4B2 595 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 KLHDC7AQ5VTJ3 777 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 RWDD4Q6NW29 188 aaKnown RBP8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 ATG14Q6ZNE5 492 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 STRADAQ7RTN6 431 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 NOP9Q86U38 636 aaKnown RBP8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 JAMLQ86YT9 394 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 MCATQ8IVS2 390 aaKnown RBP8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 SLITRK4Q8IW52 837 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 MFSD4AQ8N468 514 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 EMC1Q8N766 993 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 RXFP2Q8WXD0 754 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 CPA5Q8WXQ8 436 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 NTAN1Q96AB6 310 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 TBC1D31Q96DN5 1066 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 NDST4Q9H3R1 872 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 GEMIN8Q9NWZ8 242 aaKnown RBP8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 SIRPGQ9P1W8 387 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 LOXL2Q9Y4K0 774 aa8.65□□□□□ -1.02
COL4A3BP-206ENST00000508809 WASH4PA8MWX3 477 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 TNFRSF10CO14798 259 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 INSIG1O15503 277 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 IGSF6O95976 241 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 CYP1A1P04798 512 aaPredicted RBP8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 MMEP08473 750 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 WT1P19544 449 aaPredicted RBP8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 ITIH1P19827 911 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 MMP8P22894 467 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 TRIM23P36406 574 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 ETV5P41161 510 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 PTPN9P43378 593 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 HDAC4P56524 1084 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 YBEYP58557 167 aaPredicted RBP8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 MTM1Q13496 603 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 HLTFQ14527 1009 aaKnown RBP eCLIP8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 GRM3Q14832 879 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 CYTH1Q15438 398 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 TBR1Q16650 682 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 C15orf59Q2T9L4 293 aaPredicted RBP8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 VWA3BQ502W6 1294 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 COLEC12Q5KU26 742 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 MANEAQ5SRI9 462 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 TAF3Q5VWG9 929 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 KCTD16Q68DU8 428 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 LEKR1Q6ZMV7 388 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 C22orf34Q6ZV56 151 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 FAM214BQ7L5A3 538 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 RD3Q7Z3Z2 195 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 TMPRSS9Q7Z410 1059 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 SPRED1Q7Z699 444 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 C17orf82Q86X59 251 aaPredicted RBP8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 ZFAND4Q86XD8 727 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 ZNF677Q86XU0 584 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 RTL3Q8N8U3 475 aaKnown RBP8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 MSANTD4Q8NCY6 345 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 ATL2Q8NHH9 583 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 HTR3CQ8WXA8 447 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 USP7Q93009 1102 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms