RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 PADI3Q9ULW8 664 aa6.94□□□□□ -1.3
CHD1-205ENST00000508756 AMDHD2Q9Y303 409 aa6.94□□□□□ -1.3
CHD1-205ENST00000508756 NOTCH4Q99466 2003 aa6.94□□□□□ -1.3
CHD1-205ENST00000508756 ITGA2P17301 1181 aa6.93□□□□□ -1.3
CHD1-205ENST00000508756 NFKBIAP25963 317 aa6.93□□□□□ -1.3
CHD1-205ENST00000508756 GPATCH4Q5T3I0 446 aaKnown RBP6.93□□□□□ -1.3
CHD1-205ENST00000508756 FRG2Q64ET8 278 aa6.93□□□□□ -1.3
CHD1-205ENST00000508756 TMEM219Q86XT9 240 aa6.93□□□□□ -1.3
CHD1-205ENST00000508756 C1orf87Q8N0U7 546 aa6.93□□□□□ -1.3
CHD1-205ENST00000508756 RFLNBQ8N5W9 214 aa6.93□□□□□ -1.3
CHD1-205ENST00000508756 ACVR1CQ8NER5 493 aa6.93□□□□□ -1.3
CHD1-205ENST00000508756 APBB2Q92870 758 aa6.93□□□□□ -1.3
CHD1-205ENST00000508756 EVA1AQ9H8M9 152 aa6.93□□□□□ -1.3
CHD1-205ENST00000508756 LTB4R2Q9NPC1 389 aa6.93□□□□□ -1.3
CHD1-205ENST00000508756 DONSONQ9NYP3 566 aa6.93□□□□□ -1.3
CHD1-205ENST00000508756 PADI1Q9ULC6 663 aa6.93□□□□□ -1.3
CHD1-205ENST00000508756 CGNL1Q0VF96 1302 aa6.93□□□□□ -1.3
CHD1-205ENST00000508756 SPINT2O43291 252 aa6.92□□□□□ -1.3
CHD1-205ENST00000508756 LDB3O75112 727 aa6.92□□□□□ -1.3
CHD1-205ENST00000508756 SLC25A12O75746 678 aa6.92□□□□□ -1.3
CHD1-205ENST00000508756 EIF2S1P05198 315 aaKnown RBP6.92□□□□□ -1.3
CHD1-205ENST00000508756 MYOD1P15172 320 aa6.92□□□□□ -1.3
CHD1-205ENST00000508756 CHMP24386 653 aa6.92□□□□□ -1.3
CHD1-205ENST00000508756 PSMA4P25789 261 aaKnown RBP6.92□□□□□ -1.3
CHD1-205ENST00000508756 HOXC9P31274 260 aa6.92□□□□□ -1.3
CHD1-205ENST00000508756 FUT6P51993 359 aa6.92□□□□□ -1.3
CHD1-205ENST00000508756 DLX5P56178 289 aa6.92□□□□□ -1.3
CHD1-205ENST00000508756 TAS2R38P59533 333 aa6.92□□□□□ -1.3
CHD1-205ENST00000508756 KRTAP10-9P60411 292 aa6.92□□□□□ -1.3
CHD1-205ENST00000508756 PDE1BQ01064 536 aa6.92□□□□□ -1.3
CHD1-205ENST00000508756 ZNF771Q7L3S4 317 aaPredicted RBP6.92□□□□□ -1.3
CHD1-205ENST00000508756 RSRC2Q7L4I2 434 aaKnown RBP6.92□□□□□ -1.3
CHD1-205ENST00000508756 ARHGAP12Q8IWW6 846 aa6.92□□□□□ -1.3
CHD1-205ENST00000508756 HDAC2Q92769 488 aaKnown RBP6.92□□□□□ -1.3
CHD1-205ENST00000508756 TTC14Q96N46 770 aa6.92□□□□□ -1.3
CHD1-205ENST00000508756 DIAPH3Q9NSV4 1193 aa6.92□□□□□ -1.3
CHD1-205ENST00000508756 TMEM30AQ9NV96 361 aa6.92□□□□□ -1.3
CHD1-205ENST00000508756 EHD2Q9NZN4 543 aa6.92□□□□□ -1.3
CHD1-205ENST00000508756 ICAM5Q9UMF0 924 aa6.92□□□□□ -1.3
CHD1-205ENST00000508756 SCN5AQ14524 2016 aa6.92□□□□□ -1.3
CHD1-205ENST00000508756 A0A087X0M5 115 aa6.91□□□□□ -1.3
CHD1-205ENST00000508756 A0A1B0GX30 115 aa6.91□□□□□ -1.3
CHD1-205ENST00000508756 DGKAP23743 735 aa6.91□□□□□ -1.3
CHD1-205ENST00000508756 ZNF132P52740 706 aa6.91□□□□□ -1.3
CHD1-205ENST00000508756 GRIK2Q13002 908 aa6.91□□□□□ -1.3
CHD1-205ENST00000508756 SNX30Q5VWJ9 437 aa6.91□□□□□ -1.3
CHD1-205ENST00000508756 NCEH1Q6PIU2 408 aa6.91□□□□□ -1.3
CHD1-205ENST00000508756 NRROSQ86YC3 692 aa6.91□□□□□ -1.3
CHD1-205ENST00000508756 ADSSL1Q8N142 457 aa6.91□□□□□ -1.3
CHD1-205ENST00000508756 PDILTQ8N807 584 aa6.91□□□□□ -1.3
CHD1-205ENST00000508756 LNX1Q8TBB1 728 aaPredicted RBP6.91□□□□□ -1.3
CHD1-205ENST00000508756 ARHGEF2Q92974 986 aaKnown RBP6.91□□□□□ -1.3
CHD1-205ENST00000508756 ZKSCAN4Q969J2 545 aaPredicted RBP6.91□□□□□ -1.3
CHD1-205ENST00000508756 PDZD7Q9H5P4 517 aa6.91□□□□□ -1.3
CHD1-205ENST00000508756 RRP7BPQ9NSQ0 103 aa6.91□□□□□ -1.3
CHD1-205ENST00000508756 ACSL5Q9ULC5 683 aa6.91□□□□□ -1.3
CHD1-205ENST00000508756 CLIC4Q9Y696 253 aa6.91□□□□□ -1.3
CHD1-205ENST00000508756 TDRD9Q8NDG6 1382 aaKnown RBP6.91□□□□□ -1.3
CHD1-205ENST00000508756 LIPT2A6NK58 231 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 M0QZ24 198 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 JRKO75564 520 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 RNASEH2AO75792 299 aaKnown RBP6.9□□□□□ -1.3
CHD1-205ENST00000508756 ZNF432O94892 652 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 F7P08709 466 aaPredicted RBP6.9□□□□□ -1.3
CHD1-205ENST00000508756 CDH1P12830 882 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 UBA1P22314 1058 aaKnown RBP6.9□□□□□ -1.3
CHD1-205ENST00000508756 ISL1P61371 349 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 POU3F1Q03052 451 aaPredicted RBP6.9□□□□□ -1.3
CHD1-205ENST00000508756 NIPAL4Q0D2K0 466 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 CCDC96Q2M329 555 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 DCST1Q5T197 706 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 CCDC30Q5VVM6 783 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 BRAT1Q6PJG6 821 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 SEPT14Q6ZU15 432 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 RNF113BQ8IZP6 322 aaKnown RBP6.9□□□□□ -1.3
CHD1-205ENST00000508756 KBTBD3Q8NAB2 608 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 ANKRD52Q8NB46 1076 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 KCNH5Q8NCM2 988 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 OR5R1Q8NH85 324 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 C1orf74Q96LT6 269 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 ITPAQ9BY32 194 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 MUC13Q9H3R2 512 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 KRT84Q9NSB2 600 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 COPG2Q9UBF2 871 aa6.9□□□□□ -1.3
CHD1-205ENST00000508756 RALYQ9UKM9 306 aaKnown RBP6.9□□□□□ -1.3
CHD1-205ENST00000508756 CORO1CQ9ULV4 474 aaPredicted RBP6.9□□□□□ -1.3
CHD1-205ENST00000508756 TAF1P21675 1872 aa6.9□□□□□ -1.31
CHD1-205ENST00000508756 PGPEP1LA6NFU8 196 aa6.89□□□□□ -1.31
CHD1-205ENST00000508756 H3BQ06 376 aaPredicted RBP6.89□□□□□ -1.31
CHD1-205ENST00000508756 ATP2A1O14983 1001 aa6.89□□□□□ -1.31
CHD1-205ENST00000508756 USO1O60763 962 aaKnown RBP6.89□□□□□ -1.31
CHD1-205ENST00000508756 CAMTA2O94983 1202 aa6.89□□□□□ -1.31
CHD1-205ENST00000508756 KCNK5O95279 499 aa6.89□□□□□ -1.31
CHD1-205ENST00000508756 LAMP2P13473 410 aa6.89□□□□□ -1.31
CHD1-205ENST00000508756 MCM3P25205 808 aa6.89□□□□□ -1.31
CHD1-205ENST00000508756 GNL1P36915 607 aaPredicted RBP6.89□□□□□ -1.31
CHD1-205ENST00000508756 FASLGP48023 281 aa6.89□□□□□ -1.31
CHD1-205ENST00000508756 DECR1Q16698 335 aa6.89□□□□□ -1.31
CHD1-205ENST00000508756 LRIF1Q5T3J3 769 aa6.89□□□□□ -1.31
CHD1-205ENST00000508756 C9orf139Q6ZV77 190 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms