RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 SDHAP31040 664 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 NNMTP40261 264 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 CDKN2BP42772 138 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 RPS9P46781 194 aaKnown RBP5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 CLCN5P51795 746 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 VCPP55072 806 aaKnown RBP5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 GNA12Q03113 381 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 FAPQ12884 760 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 LMAN2Q12907 356 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 RFTN1Q14699 578 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 POLD3Q15054 466 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 CA9Q16790 459 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 KRTAP19-4Q3LI73 84 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 ALFQ53S48 1182 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 INO80DQ53TQ3 878 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZNF569Q5MCW4 686 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 FAM72AQ5TYM5 149 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 AFMIDQ63HM1 303 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 SLC9A4Q6AI14 798 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 TXNRD3NBQ6F5E7 133 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 FAM72DQ6L9T8 149 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 CXorf57Q6NSI4 855 aaKnown RBP5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 TIGD7Q6NT04 549 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 RETSATQ6NUM9 610 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 TPRG1Q6ZUI0 275 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 FAM72BQ86X60 149 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 TMEM151BQ8IW70 566 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 CARFQ8N187 725 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 CFAP52Q8N1V2 620 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 PYROXD2Q8N2H3 581 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 CARNMT1Q8N4J0 409 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 DCAF4L2Q8NA75 395 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 RAPGEF5Q92565 580 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 KRT35Q92764 455 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 ARHGEF2Q92974 986 aaKnown RBP5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 FATE1Q969F0 183 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 LMLNQ96KR4 655 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 FERMT1Q9BQL6 677 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 FEM1AQ9BSK4 669 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 OSBPL8Q9BZF1 889 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 PARD6AQ9NPB6 346 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 ACSS2Q9NR19 701 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 HOMER3Q9NSC5 361 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 GPATCH2LQ9NWQ4 482 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 ELOVL2Q9NXB9 296 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 PLK2Q9NYY3 685 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 MPP6Q9NZW5 540 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 H2AFY2Q9P0M6 372 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 RNF14Q9UBS8 474 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 AMACRQ9UHK6 382 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 GGA2Q9UJY4 613 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 PLA2G4CQ9UP65 541 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 NEU3Q9UQ49 428 aa5.58□□□□□ -1.52
HMGB1P44-201ENST00000508597 hCG_1818297A0A087WSY0 165 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 A0A0U1RQJ8 604 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 CTAGE9A4FU28 777 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 KRTAP9-7A8MTY7 169 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 HACD1B0YJ81 288 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 SCDO00767 359 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 MTSS1O43312 755 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 KDELR3O43731 214 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 KRT37O76014 449 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 IL18BPO95998 194 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 S100BP04271 92 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 DLDP09622 509 aaKnown RBP5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 CHRNB1P11230 501 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 TNNT1P13805 278 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 HOXA5P20719 270 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 CCNCP24863 283 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 GJC1P36383 396 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 FNTBP49356 437 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 SGSHP51688 502 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 SESN3P58005 492 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 ST8SIA6P61647 398 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 GNG11P61952 73 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 ECT2LQ008S8 904 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 XRCC4Q13426 336 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 TUBB2AQ13885 445 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 PDK1Q15118 436 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 PON2Q15165 354 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 FSCBQ5H9T9 825 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 DAB2IPQ5VWQ8 1189 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 PAPD7Q5XG87 772 aaKnown RBP5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 CD276Q5ZPR3 534 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 MFSD7Q6UXD7 560 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 TTLL10Q6ZVT0 673 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 BBS12Q6ZW61 710 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 TFAP2DQ7Z6R9 452 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZC3H18Q86VM9 953 aaKnown RBP5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZSCAN30Q86W11 494 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 RFX6Q8HWS3 928 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 CCDC50Q8IVM0 306 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 SLC35F6Q8N357 371 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 BBS5Q8N3I7 341 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 PLD5Q8N7P1 536 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 NSMCE1Q8WV22 266 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 ATRIPQ8WXE1 791 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 P3H4Q92791 437 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 ISG20Q96AZ6 181 aaKnown RBP5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 CLDN23Q96B33 292 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms