RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 CSNK1G3Q9Y6M4 447 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 DGKBQ9Y6T7 804 aa9.1□□□□□ -0.95
NUP54-207ENST00000508583 GOLGA8CPA6NN73 597 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 SMAPO00193 183 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 GDF9O60383 454 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 USP12O75317 370 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 TNFP01375 233 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 CTSEP14091 401 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 GM2AP17900 193 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 CSRP1P21291 193 aaKnown RBP9.09□□□□□ -0.95
NUP54-207ENST00000508583 HK3P52790 923 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 SRP54P61011 504 aaKnown RBP9.09□□□□□ -0.95
NUP54-207ENST00000508583 DR1Q01658 176 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 SKIDA1Q1XH10 827 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 ALS2CLQ60I27 953 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 MAATS1Q7Z4T9 603 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 SPATS2Q86XZ4 545 aaKnown RBP9.09□□□□□ -0.95
NUP54-207ENST00000508583 NAXDQ8IW45 347 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 PHACTR4Q8IZ21 702 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 C17orf53Q8N3J3 647 aaPredicted RBP9.09□□□□□ -0.95
NUP54-207ENST00000508583 PLA2G15Q8NCC3 412 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 PPHLN1Q8NEY8 458 aaKnown RBP9.09□□□□□ -0.95
NUP54-207ENST00000508583 KIF18AQ8NI77 898 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 STYXQ8WUJ0 223 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 PTCD2Q8WV60 388 aaKnown RBP9.09□□□□□ -0.95
NUP54-207ENST00000508583 HEXDCQ8WVB3 486 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 SCAMP4Q969E2 229 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.09□□□□□ -0.95
NUP54-207ENST00000508583 FUBP1Q96AE4 644 aaKnown RBP9.09□□□□□ -0.95
NUP54-207ENST00000508583 ULK4Q96C45 1275 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 VPS35Q96QK1 796 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 TTC1Q99614 292 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 IL22Q9GZX6 179 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 XAB2Q9HCS7 855 aaKnown RBP9.09□□□□□ -0.95
NUP54-207ENST00000508583 BFARQ9NZS9 450 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 IL17CQ9P0M4 197 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 VPS18Q9P253 973 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 APOBEC3BQ9UH17 382 aaKnown RBP9.09□□□□□ -0.95
NUP54-207ENST00000508583 ASIC3Q9UHC3 531 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 DOLKQ9UPQ8 538 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 SPO11Q9Y5K1 396 aa9.09□□□□□ -0.95
NUP54-207ENST00000508583 ASCC3Q8N3C0 2202 aaKnown RBP9.09□□□□□ -0.95
NUP54-207ENST00000508583 CEP250Q9BV73 2442 aa9.09□□□□□ -0.96
NUP54-207ENST00000508583 GLYATL1P3A0A0U1RQE8 302 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 PRSS38A1L453 326 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 F8W8V4 182 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 TPP1O14773 563 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 PIAS2O75928 621 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 SLC25A14O95258 325 aaPredicted RBP9.08□□□□□ -0.96
NUP54-207ENST00000508583 PRAMEF1O95521 474 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 ZSCAN5DPP0CG00 497 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 RALBP11234 206 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 MLNP12872 115 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 CEACAM1P13688 526 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 ETS1P14921 441 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 BPIP17213 487 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 ITGALP20701 1170 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 ADRA1DP25100 572 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 PPARGP37231 505 aaPredicted RBP9.08□□□□□ -0.96
NUP54-207ENST00000508583 ADCY8P40145 1251 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 MAGEA6P43360 314 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 ID4P47928 161 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 NPY2RP49146 381 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 VPS41P49754 854 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 PTK6Q13882 451 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 GTF2H3Q13889 308 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 LRP8Q14114 963 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 SEPT6Q14141 434 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 SPARCL1Q14515 664 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 PTPRRQ15256 657 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 WHAMMP3Q1A5X7 153 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 LDLRAP1Q5SW96 308 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 DENND5AQ6IQ26 1287 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 TTC27Q6P3X3 843 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 LVRNQ6Q4G3 990 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 GKN2Q86XP6 184 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 HID1Q8IV36 788 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 KLHL7Q8IXQ5 586 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 PPIL6Q8IXY8 311 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 TTC30BQ8N4P2 665 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 TAB3Q8N5C8 712 aaPredicted RBP9.08□□□□□ -0.96
NUP54-207ENST00000508583 BBOF1Q8ND07 529 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 MCUQ8NE86 351 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 MNS1Q8NEH6 495 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 SAP25Q8TEE9 199 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 SETD7Q8WTS6 366 aaKnown RBP9.08□□□□□ -0.96
NUP54-207ENST00000508583 GLMNQ92990 594 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 GLYATL1Q969I3 302 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 COX14Q96I36 57 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 TTC25Q96NG3 672 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 RANBP9Q96S59 729 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 FRMD8Q9BZ67 464 aaPredicted RBP9.08□□□□□ -0.96
NUP54-207ENST00000508583 DDX47Q9H0S4 455 aaKnown RBP9.08□□□□□ -0.96
NUP54-207ENST00000508583 CASS4Q9NQ75 786 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 SMOXQ9NWM0 555 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 DLL3Q9NYJ7 618 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 NLGN3Q9NZ94 848 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 SMARCAL1Q9NZC9 954 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 MOSPD1Q9UJG1 213 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 RIMKLBQ9ULI2 386 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms