RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 DEF6Q9H4E7 631 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 LCMT1Q9UIC8 334 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 CNOT6Q9ULM6 557 aaKnown RBP16.14■□□□□ 0.17
LMNA-222ENST00000508500 LRRD1A4D1F6 860 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 AGRPO00253 132 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 ITGA2BP08514 1039 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 PLA2G2AP14555 144 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 MX2P20592 715 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 ETV5P41161 510 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 CD86P42081 329 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 EPHB1P54762 984 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 OR1D5P58170 312 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 IFI35P80217 286 aaPredicted RBP16.13■□□□□ 0.17
LMNA-222ENST00000508500 CLN3Q13286 438 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 NR1D2Q14995 579 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 PYCR3Q53H96 274 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 SLC30A9Q6PML9 568 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 ZNF574Q6ZN55 896 aaPredicted RBP16.13■□□□□ 0.17
LMNA-222ENST00000508500 ZNF438Q7Z4V0 828 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 NDUFAF2Q8N183 169 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 FBXO39Q8N4B4 442 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 CCNYQ8ND76 341 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 LPCAT1Q8NF37 534 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 OLFM3Q96PB7 478 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 CEP41Q9BYV8 373 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 SEMA6CQ9H3T2 930 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 HYOU1Q9Y4L1 999 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 HEY1Q9Y5J3 304 aa16.13■□□□□ 0.17
LMNA-222ENST00000508500 OAS3Q9Y6K5 1087 aaKnown RBP16.13■□□□□ 0.17
LMNA-222ENST00000508500 FADS2P1A8MWK0 482 aa16.12■□□□□ 0.17
LMNA-222ENST00000508500 ZNF487B1APH4 448 aa16.12■□□□□ 0.17
LMNA-222ENST00000508500 ANKRD66B4E2M5 251 aa16.12■□□□□ 0.17
LMNA-222ENST00000508500 PPM1DO15297 605 aa16.12■□□□□ 0.17
LMNA-222ENST00000508500 INPP4BO15327 924 aa16.12■□□□□ 0.17
LMNA-222ENST00000508500 EML2O95834 649 aa16.12■□□□□ 0.17
LMNA-222ENST00000508500 ITIH1P19827 911 aa16.12■□□□□ 0.17
LMNA-222ENST00000508500 SLC5A2P31639 672 aa16.12■□□□□ 0.17
LMNA-222ENST00000508500 ARHGAP25P42331 645 aa16.12■□□□□ 0.17
LMNA-222ENST00000508500 MLLT3P42568 568 aaPredicted RBP16.12■□□□□ 0.17
LMNA-222ENST00000508500 ILF3Q12906 894 aaKnown RBP eCLIP16.12■□□□□ 0.17
LMNA-222ENST00000508500 ZFYVE27Q5T4F4 411 aa16.12■□□□□ 0.17
LMNA-222ENST00000508500 ARHGAP40Q5TG30 622 aa16.12■□□□□ 0.17
LMNA-222ENST00000508500 RNF25Q96BH1 459 aaPredicted RBP16.12■□□□□ 0.17
LMNA-222ENST00000508500 CCDC42Q96M95 316 aa16.12■□□□□ 0.17
LMNA-222ENST00000508500 TMEM74Q96NL1 305 aa16.12■□□□□ 0.17
LMNA-222ENST00000508500 TRIB3Q96RU7 358 aa16.12■□□□□ 0.17
LMNA-222ENST00000508500 BRD8Q9H0E9 1235 aa16.12■□□□□ 0.17
LMNA-222ENST00000508500 RDH14Q9HBH5 336 aa16.12■□□□□ 0.17
LMNA-222ENST00000508500 ZNHIT6Q9NWK9 470 aaKnown RBP16.12■□□□□ 0.17
LMNA-222ENST00000508500 EFSO43281 561 aa16.11■□□□□ 0.17
LMNA-222ENST00000508500 DNAJC6O75061 913 aa16.11■□□□□ 0.17
LMNA-222ENST00000508500 ATP1A1P05023 1023 aaKnown RBP16.11■□□□□ 0.17
LMNA-222ENST00000508500 ZNF75DP51815 510 aa16.11■□□□□ 0.17
LMNA-222ENST00000508500 TMPRSS3P57727 454 aa16.11■□□□□ 0.17
LMNA-222ENST00000508500 RPL26P61254 145 aaKnown RBP16.11■□□□□ 0.17
LMNA-222ENST00000508500 EIF3IQ13347 325 aaKnown RBP16.11■□□□□ 0.17
LMNA-222ENST00000508500 C16orf72Q14CZ0 275 aa16.11■□□□□ 0.17
LMNA-222ENST00000508500 TCEAL1Q15170 157 aa16.11■□□□□ 0.17
LMNA-222ENST00000508500 HENMT1Q5T8I9 393 aaKnown RBP16.11■□□□□ 0.17
LMNA-222ENST00000508500 MARK2Q7KZI7 788 aaKnown RBP16.11■□□□□ 0.17
LMNA-222ENST00000508500 VSIG1Q86XK7 387 aa16.11■□□□□ 0.17
LMNA-222ENST00000508500 RHOT2Q8IXI1 618 aa16.11■□□□□ 0.17
LMNA-222ENST00000508500 NRSN1Q8IZ57 195 aa16.11■□□□□ 0.17
LMNA-222ENST00000508500 EXD1Q8NHP7 514 aa16.11■□□□□ 0.17
LMNA-222ENST00000508500 KIAA1524Q8TCG1 905 aa16.11■□□□□ 0.17
LMNA-222ENST00000508500 TADA1Q96BN2 335 aa16.11■□□□□ 0.17
LMNA-222ENST00000508500 WBP1Q96G27 269 aa16.11■□□□□ 0.17
LMNA-222ENST00000508500 OR2M4Q96R27 311 aa16.11■□□□□ 0.17
LMNA-222ENST00000508500 NUDT22Q9BRQ3 303 aa16.11■□□□□ 0.17
LMNA-222ENST00000508500 RPL26L1Q9UNX3 145 aaKnown RBP16.11■□□□□ 0.17
LMNA-222ENST00000508500 LOXL2Q9Y4K0 774 aa16.11■□□□□ 0.17
LMNA-222ENST00000508500 PCDHGA7Q9Y5G6 932 aa16.11■□□□□ 0.17
LMNA-222ENST00000508500 ZNF106Q9H2Y7 1883 aaKnown RBP16.1■□□□□ 0.17
LMNA-222ENST00000508500 C1orf232A0A0U1RR37 186 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 GOLGA6L6A8MZA4 724 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 TMX2-CTNND1H3BSU7 103 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 ERVH48-1M5A8F1 160 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 APOL1O14791 398 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 KRT1P04264 644 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 KRT10P13645 584 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 CD1CP29017 333 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 ACTR1BP42025 376 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 NOP2P46087 812 aaKnown RBP16.1■□□□□ 0.17
LMNA-222ENST00000508500 SPINT3P49223 89 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 ACTR1AP61163 376 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 CFHR1Q03591 330 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 ADCY2Q08462 1091 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 AP1B1Q10567 949 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 GALNT3Q14435 633 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 TGIF1Q15583 401 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 LRRC38Q5VT99 294 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 BROXQ5VW32 411 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 MFSD7Q6UXD7 560 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 USP53Q70EK8 1073 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 RAVER1Q8IY67 606 aaKnown RBP16.1■□□□□ 0.17
LMNA-222ENST00000508500 IMP4Q96G21 291 aaKnown RBP16.1■□□□□ 0.17
LMNA-222ENST00000508500 MLPHQ9BV36 600 aaPredicted RBP16.1■□□□□ 0.17
LMNA-222ENST00000508500 STRADBQ9C0K7 418 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 GOLPH3Q9H4A6 298 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 SAE1Q9UBE0 346 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms