RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 RABL3Q5HYI8 236 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 OR2T34Q8NGX1 318 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 OR2T3Q8NH03 318 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 ASB9Q96DX5 294 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 CDKN2AIPNLQ96HQ2 116 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 TMEM74Q96NL1 305 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 TRMOQ9BU70 441 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 LIMD1Q9UGP4 676 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 BCAS2O75934 225 aaPredicted RBP12.83□□□□□ -0.36
SMG7-214ENST00000508461 LPOP22079 712 aaPredicted RBP12.83□□□□□ -0.36
SMG7-214ENST00000508461 RPL38P63173 70 aaKnown RBP12.83□□□□□ -0.36
SMG7-214ENST00000508461 SEMA3BQ13214 749 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 PIGGQ5H8A4 983 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 MSANTD2Q6P1R3 559 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 FBXL19Q6PCT2 694 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 C16orf87Q6PH81 154 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 MFSD6LQ8IWD5 586 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 LSMEM2Q8N112 164 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 GFM2Q969S9 779 aaKnown RBP12.83□□□□□ -0.36
SMG7-214ENST00000508461 GORASP1Q9BQQ3 440 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 PCDHB8Q9UN66 801 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 RAI2Q9Y5P3 530 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 DOCK3Q8IZD9 2030 aa12.83□□□□□ -0.36
SMG7-214ENST00000508461 TCAF2A6NFQ2 919 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 HNRNPCP07910 306 aaKnown RBP eCLIP12.82□□□□□ -0.364e-7■■□□□ 11.5
SMG7-214ENST00000508461 SPATA31D3P0C874 917 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 CCND3P30281 292 aaPredicted RBP12.82□□□□□ -0.36
SMG7-214ENST00000508461 NDST2P52849 883 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 HERVK_113P63132 956 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 RGMBQ6NW40 437 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 PGM2L1Q6PCE3 622 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 SPATA31D4Q6ZUB0 917 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 GPRIN3Q6ZVF9 776 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 CLEC14AQ86T13 490 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 DHRSXQ8N5I4 330 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 TCF12Q99081 682 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 ERVK-6Q9BXR3 956 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 DNMT3LQ9UJW3 386 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 CNOT6Q9ULM6 557 aaKnown RBP12.82□□□□□ -0.36
SMG7-214ENST00000508461 RAB26Q9ULW5 256 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 NR1H2P55055 460 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 ZNF598Q86UK7 904 aaKnown RBP12.82□□□□□ -0.36
SMG7-214ENST00000508461 CAMK1DQ8IU85 385 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 MRPS26Q9BYN8 205 aaKnown RBP12.82□□□□□ -0.36
SMG7-214ENST00000508461 ASB8Q9H765 288 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 ACTR8Q9H981 624 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 OSER1Q9NX31 292 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 ANAPC2Q9UJX6 822 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 ZNF195O14628 629 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 SEPT4O43236 478 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 SEC22BO75396 215 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 C1RP00736 705 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 FKBP1BP68106 108 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 RAB41Q5JT25 222 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 ATXN7L2Q5T6C5 722 aaPredicted RBP12.82□□□□□ -0.36
SMG7-214ENST00000508461 AFTPHQ6ULP2 937 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 BRSK1Q8TDC3 778 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 TRIB2Q92519 343 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 PGAP3Q96FM1 320 aaPredicted RBP12.82□□□□□ -0.36
SMG7-214ENST00000508461 IMP4Q96G21 291 aaKnown RBP12.82□□□□□ -0.36
SMG7-214ENST00000508461 VPS9D1Q9Y2B5 631 aa12.82□□□□□ -0.36
SMG7-214ENST00000508461 POLR3HQ9Y535 204 aaPredicted RBP12.82□□□□□ -0.36
SMG7-214ENST00000508461 H3BSA7 217 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 PKMP14618 531 aaKnown RBP12.81□□□□□ -0.36
SMG7-214ENST00000508461 ADSLP30566 484 aaPredicted RBP12.81□□□□□ -0.36
SMG7-214ENST00000508461 CORO1AP31146 461 aaKnown RBP12.81□□□□□ -0.36
SMG7-214ENST00000508461 FOXA1P55317 472 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 CREB5Q02930 508 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 SREBF2Q12772 1141 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 LCP2Q13094 533 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 PARP15Q460N3 678 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 ZNF678Q5SXM1 525 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 ARHGAP22Q7Z5H3 698 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 SERINC5Q86VE9 423 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 DBF4BQ8NFT6 615 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 NRBF2Q96F24 287 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 OSBPL11Q9BXB4 747 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 MFSD1Q9H3U5 465 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 SOX17Q9H6I2 414 aaPredicted RBP12.81□□□□□ -0.36
SMG7-214ENST00000508461 IGSF5Q9NSI5 407 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 U3KQV3 271 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 A0A1B0GVG6 124 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 HHLA1C9JL84 531 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 OR1I1O60431 355 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 SNAP91O60641 907 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 SLC22A3O75751 556 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 GSSP48637 474 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 LIPEQ05469 1076 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 IL10RBQ08334 325 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 C16orf72Q14CZ0 275 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 TRIP4Q15650 581 aaPredicted RBP12.81□□□□□ -0.36
SMG7-214ENST00000508461 CPSF6Q16630 551 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMG7-214ENST00000508461 PGS1Q32NB8 556 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 HECTD3Q5T447 861 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 TMEM214Q6NUQ4 689 aaKnown RBP12.81□□□□□ -0.36
SMG7-214ENST00000508461 DET1Q7L5Y6 550 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 PTERQ96BW5 349 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 RTP3Q9BQQ7 232 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 HCSTQ9UBK5 93 aa12.81□□□□□ -0.36
SMG7-214ENST00000508461 SLC45A1Q9Y2W3 748 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms