RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 C16orf87Q6PH81 154 aa13.39□□□□□ -0.27
SNCAIP-209ENST00000508017 ZNF354CQ86Y25 554 aa13.39□□□□□ -0.27
SNCAIP-209ENST00000508017 SLC15A4Q8N697 577 aa13.39□□□□□ -0.27
SNCAIP-209ENST00000508017 DDHD1Q8NEL9 900 aa13.39□□□□□ -0.27
SNCAIP-209ENST00000508017 SMARCD1Q96GM5 515 aa13.39□□□□□ -0.27
SNCAIP-209ENST00000508017 FCRL2Q96LA5 508 aaPredicted RBP13.39□□□□□ -0.27
SNCAIP-209ENST00000508017 KLHL5Q96PQ7 755 aa13.39□□□□□ -0.27
SNCAIP-209ENST00000508017 KCTD14Q9BQ13 255 aaPredicted RBP13.39□□□□□ -0.27
SNCAIP-209ENST00000508017 TSPYL2Q9H2G4 693 aaPredicted RBP13.39□□□□□ -0.27
SNCAIP-209ENST00000508017 FANCEQ9HB96 536 aa13.39□□□□□ -0.27
SNCAIP-209ENST00000508017 NT5MQ9NPB1 228 aa13.39□□□□□ -0.27
SNCAIP-209ENST00000508017 TLR9Q9NR96 1032 aa13.39□□□□□ -0.27
SNCAIP-209ENST00000508017 SELENONQ9NZV5 590 aa13.39□□□□□ -0.27
SNCAIP-209ENST00000508017 ANAPC2Q9UJX6 822 aa13.39□□□□□ -0.27
SNCAIP-209ENST00000508017 RRN3P2A6NIE6 340 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 SNAP91O60641 907 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 MATN4O95460 622 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 MTHFD2P13995 350 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 LBPP18428 481 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 FUT4P22083 530 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 AXLP30530 894 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 TTKP33981 857 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 SHMT2P34897 504 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 IREB2P48200 963 aaKnown RBP13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 HLCSP50747 726 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 CLCNKBP51801 687 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 MLLT10P55197 1068 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 ITKQ08881 620 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 POLD3Q15054 466 aaPredicted RBP13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 OTUD3Q5T2D3 398 aaPredicted RBP13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 MANEALQ5VSG8 457 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 DCP1BQ8IZD4 617 aaKnown RBP13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 GOLM1Q8NBJ4 401 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 OR13F1Q8NGS4 319 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 SGCDQ92629 289 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 MUS81Q96NY9 551 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 PAAF1Q9BRP4 392 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 TIMM22Q9Y584 194 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 PCDHGA4Q9Y5G9 962 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 CEP350Q5VT06 3117 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 SMIM35A0A1B0GVV1 85 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 TMEM221A6NGB7 291 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 IRAK2O43187 625 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 IGLV3-25P01717 112 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 FGF4P08620 206 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 C7P10643 843 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 HOXD8P13378 290 aaPredicted RBP13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 EEF1B2P24534 225 aaKnown RBP13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 DSC2Q02487 901 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 CCNYL2Q5T2Q4 361 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 TWF2Q6IBS0 349 aaKnown RBP13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 TMEM214Q6NUQ4 689 aaKnown RBP13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 KIAA2013Q8IYS2 634 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 DCPSQ96C86 337 aaKnown RBP13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 PABPC5Q96DU9 382 aaKnown RBP13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 ATP13A1Q9HD20 1204 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 PKD2L2Q9NZM6 624 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 KCNH4Q9UQ05 1017 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 GPR45Q9Y5Y3 372 aa13.38□□□□□ -0.27
SNCAIP-209ENST00000508017 COL4A4P53420 1690 aaPredicted RBP13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 TREHO43280 583 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 COQ9O75208 318 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 SERPINB7O75635 380 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 KCNH1O95259 989 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 CPNE6O95741 557 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 PEX11BO96011 259 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 LDLRP01130 860 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 MYL3P08590 195 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 FCGR1AP12314 374 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 HRH2P25021 359 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 MAP4P27816 1152 aaKnown RBP13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 ZFP36L2P47974 494 aaKnown RBP13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 LHX1P48742 406 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 EIF4EBP2Q13542 120 aaPredicted RBP13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 MOGQ16653 247 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 DUSP28Q4G0W2 176 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 SCIMPQ6UWF3 145 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 ITIH5Q86UX2 942 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 BPIFB6Q8NFQ5 453 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 BIRC7Q96CA5 298 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 RTP3Q9BQQ7 232 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 TRIM54Q9BYV2 358 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 SLC25A51Q9H1U9 297 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 NOL6Q9H6R4 1146 aaKnown RBP13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 CATSPERBQ9H7T0 1116 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 ARNT2Q9HBZ2 717 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 SEMA4BQ9NPR2 832 aaPredicted RBP13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 INTS7Q9NVH2 962 aaKnown RBP13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 TMLHEQ9NVH6 421 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 INTS10Q9NVR2 710 aaKnown RBP13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 MAGED1Q9Y5V3 778 aaPredicted RBP13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 PTCH2Q9Y6C5 1203 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 A0A1W2PP18 115 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 J3KR12 359 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 SLC7A4O43246 635 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 CLASP2O75122 1294 aaKnown RBP13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 GJB3O75712 270 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 MMP2P08253 660 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 ZNF12P17014 697 aa13.37□□□□□ -0.27
SNCAIP-209ENST00000508017 CCNA2P20248 432 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms