RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 BTN2A2Q8WVV5 523 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 PPP1R14BQ96C90 147 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 TBATAQ96M53 351 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 CCDC42Q96M95 316 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 RAB3IPQ96QF0 476 aaPredicted RBP8.06□□□□□ -1.12
SCN1A-207ENST00000507401 PSKH2Q96QS6 385 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.06□□□□□ -1.12
SCN1A-207ENST00000507401 ATP13A3Q9H7F0 1226 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 FZD3Q9NPG1 666 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 GPATCH2LQ9NWQ4 482 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 DNAJC28Q9NX36 388 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 CHCHD3Q9NX63 227 aaKnown RBP8.06□□□□□ -1.12
SCN1A-207ENST00000507401 NLGN3Q9NZ94 848 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 NCKIPSDQ9NZQ3 722 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 SAMD15Q9P1V8 674 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 RCOR3Q9P2K3 495 aaPredicted RBP8.06□□□□□ -1.12
SCN1A-207ENST00000507401 IP6K2Q9UHH9 426 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 IPO11Q9UI26 975 aaKnown RBP8.06□□□□□ -1.12
SCN1A-207ENST00000507401 SALL4Q9UJQ4 1053 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 SLC12A4Q9UP95 1085 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.06□□□□□ -1.12
SCN1A-207ENST00000507401 WDFY3Q8IZQ1 3526 aa8.06□□□□□ -1.12
SCN1A-207ENST00000507401 GOLGA4Q13439 2230 aaKnown RBP8.05□□□□□ -1.12
SCN1A-207ENST00000507401 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.05□□□□□ -1.12
SCN1A-207ENST00000507401 SSU72P8A0A1W2PR75 194 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 LRRD1A4D1F6 860 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 CDC14CA4D256 554 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 FAM181BA6NEQ2 426 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 H3BRJ5 948 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 CCDC188H7C350 402 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 INSIG1O15503 277 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 MMP20O60882 483 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 GP1BAP07359 652 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 RARAP10276 462 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 JUPP14923 745 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 IL1R2P27930 398 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 SERPINA4P29622 427 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 DUSP3P51452 185 aaPredicted RBP8.05□□□□□ -1.12
SCN1A-207ENST00000507401 PDE1CQ14123 709 aaPredicted RBP8.05□□□□□ -1.12
SCN1A-207ENST00000507401 TDRD12Q587J7 1177 aaKnown RBP8.05□□□□□ -1.12
SCN1A-207ENST00000507401 RALGPS1Q5JS13 557 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 SH2D4BQ5SQS7 431 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 ERAP2Q6P179 960 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 MAATS1Q7Z4T9 603 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 PTAR1Q7Z6K3 402 aaPredicted RBP8.05□□□□□ -1.12
SCN1A-207ENST00000507401 CAMK1DQ8IU85 385 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 SDR16C5Q8N3Y7 309 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 TSEN2Q8NCE0 465 aaKnown RBP8.05□□□□□ -1.12
SCN1A-207ENST00000507401 ARL8AQ96BM9 186 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 ECHDC3Q96DC8 303 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 CHMP6Q96FZ7 201 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 CELF6Q96J87 481 aaKnown RBP8.05□□□□□ -1.12
SCN1A-207ENST00000507401 TRAPPC9Q96Q05 1148 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 MYOCQ99972 504 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 NRSN2Q9GZP1 204 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 THAP2Q9H0W7 228 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 VCXQ9H320 206 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 UCKL1Q9NWZ5 548 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 SEPT3Q9UH03 358 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 GGT7Q9UJ14 662 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 DOLKQ9UPQ8 538 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 REXO2Q9Y3B8 237 aaKnown RBP8.05□□□□□ -1.12
SCN1A-207ENST00000507401 DYRK1BQ9Y463 629 aa8.05□□□□□ -1.12
SCN1A-207ENST00000507401 TDRD6O60522 2096 aaKnown RBP8.05□□□□□ -1.12
SCN1A-207ENST00000507401 DSPP15924 2871 aaKnown RBP8.05□□□□□ -1.12
SCN1A-207ENST00000507401 A6NHS1 94 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 BTNL10A8MVZ5 291 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 K7ESM1 405 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 DFFAO00273 331 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 HNRNPCL1O60812 293 aaKnown RBP8.04□□□□□ -1.12
SCN1A-207ENST00000507401 SDC3O75056 442 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 ANP32DO95626 131 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 PEX11BO96011 259 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 HOXC4P09017 264 aaPredicted RBP8.04□□□□□ -1.12
SCN1A-207ENST00000507401 IMPDH2P12268 514 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 ITIH2P19823 946 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 AMPD1P23109 780 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 IL4RP24394 825 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 NFKBIAP25963 317 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 SERPINB6P35237 376 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 EIF4A3P38919 411 aaKnown RBP8.04□□□□□ -1.12
SCN1A-207ENST00000507401 BLKP51451 505 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 THOP1P52888 689 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 CDH6P55285 790 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 AP1S1P61966 158 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 DAB2P98082 770 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 BCL2L1Q07817 233 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 EIF2B5Q13144 721 aaKnown RBP8.04□□□□□ -1.12
SCN1A-207ENST00000507401 RTP5Q14D33 572 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 SETDB1Q15047 1291 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 LRRC14Q15048 493 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 DBN1Q16643 649 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 HADHQ16836 314 aaKnown RBP8.04□□□□□ -1.12
SCN1A-207ENST00000507401 CCDC157Q569K6 752 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 SPDYAQ5MJ70 313 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 ZCCHC8Q6NZY4 707 aaKnown RBP8.04□□□□□ -1.12
SCN1A-207ENST00000507401 LVRNQ6Q4G3 990 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 RBM12BQ8IXT5 1001 aaKnown RBP8.04□□□□□ -1.12
SCN1A-207ENST00000507401 BBS5Q8N3I7 341 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 NPWQ8N729 165 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms