RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 GALNT16Q8N428 558 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 ZBTB2Q8N680 514 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 ENDOVQ8N8Q3 282 aaKnown RBP7.15□□□□□ -1.26
VCAN-207ENST00000507162 IQUBQ8NA54 791 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 NRGNQ92686 78 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 CNDP1Q96KN2 507 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 MLPHQ9BV36 600 aaPredicted RBP7.15□□□□□ -1.26
VCAN-207ENST00000507162 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.15□□□□□ -1.26
VCAN-207ENST00000507162 CHST8Q9H2A9 424 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 KCTD10Q9H3F6 313 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 SUV39H2Q9H5I1 410 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 ZNF552Q9H707 407 aaPredicted RBP7.15□□□□□ -1.26
VCAN-207ENST00000507162 ANLNQ9NQW6 1124 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 CCM2LQ9NUG4 571 aaPredicted RBP7.15□□□□□ -1.26
VCAN-207ENST00000507162 OLAHQ9NV23 265 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 ZNHIT2Q9UHR6 403 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 ATP8A1Q9Y2Q0 1164 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 TMEM98Q9Y2Y6 226 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 CSAG2Q9Y5P2 127 aa7.15□□□□□ -1.26
VCAN-207ENST00000507162 A0A1W2PQJ5 194 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 ANKRD36A6QL64 1941 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 MAPK13O15264 365 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 SNX2O60749 519 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 TMCC1O94876 653 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 KLK3P07288 261 aaPredicted RBP7.14□□□□□ -1.27
VCAN-207ENST00000507162 ELFN1P0C7U0 828 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 ESRRAP11474 423 aaPredicted RBP7.14□□□□□ -1.27
VCAN-207ENST00000507162 NR2F2P24468 414 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 DNAJA1P31689 397 aaKnown RBP7.14□□□□□ -1.27
VCAN-207ENST00000507162 OTX2P32243 289 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 MMP12P39900 470 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 RPL34P49207 117 aaKnown RBP7.14□□□□□ -1.27
VCAN-207ENST00000507162 EPHA4P54764 986 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 CSNK1G2P78368 415 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 TUBB3Q13509 450 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 CUL4BQ13620 913 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 MYBPC3Q14896 1274 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 LCN10Q6JVE6 187 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 FAM173BQ6P4H8 233 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 CNNM4Q6P4Q7 775 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 IYDQ6PHW0 289 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 GFRALQ6UXV0 394 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 LIPIQ6XZB0 460 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 FAM92BQ6ZTR7 304 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 OR2M4Q96R27 311 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 WDR77Q9BQA1 342 aaPredicted RBP7.14□□□□□ -1.27
VCAN-207ENST00000507162 FRMD8Q9BZ67 464 aaPredicted RBP7.14□□□□□ -1.27
VCAN-207ENST00000507162 CUEDC2Q9H467 287 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 SARS2Q9NP81 518 aaKnown RBP7.14□□□□□ -1.27
VCAN-207ENST00000507162 WASH6PQ9NQA3 447 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 CNOT8Q9UFF9 292 aaKnown RBP7.14□□□□□ -1.27
VCAN-207ENST00000507162 DNAI1Q9UI46 699 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 TCFL5Q9UL49 500 aa7.14□□□□□ -1.27
VCAN-207ENST00000507162 NOVA2Q9UNW9 492 aaKnown RBP7.14□□□□□ -1.27
VCAN-207ENST00000507162 CACNA1CQ13936 2221 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 I6L893 689 aaPredicted RBP7.13□□□□□ -1.27
VCAN-207ENST00000507162 MASP2O00187 686 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 CREB3O43889 395 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 STX10O60499 249 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 KLHL41O60662 606 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 IPO13O94829 963 aaKnown RBP7.13□□□□□ -1.27
VCAN-207ENST00000507162 C9P02748 559 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 IVLP07476 585 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 FOLR1P15328 257 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 TBXAS1P24557 533 aaPredicted RBP7.13□□□□□ -1.27
VCAN-207ENST00000507162 RPL13P26373 211 aaKnown RBP7.13□□□□□ -1.27
VCAN-207ENST00000507162 ETFBP38117 255 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 SMSP52788 366 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 MARSP56192 900 aaKnown RBP7.13□□□□□ -1.27
VCAN-207ENST00000507162 CDK3Q00526 305 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 KCNAB1Q14722 419 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 TCERG1LQ5VWI1 586 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 IZUMO3Q5VZ72 239 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 FAAH2Q6GMR7 532 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 RWDD4Q6NW29 188 aaKnown RBP7.13□□□□□ -1.27
VCAN-207ENST00000507162 ADGRD1Q6QNK2 874 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 CLEC9AQ6UXN8 241 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 TMEM110Q86TL2 294 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 BIVMQ86UB2 503 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 TMEM200AQ86VY9 491 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 CAMK1DQ8IU85 385 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 GRAMD1CQ8IYS0 662 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 TTC30BQ8N4P2 665 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 UBR7Q8N806 425 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 BCORP1Q8N888 145 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 SIDT2Q8NBJ9 832 aaKnown RBP7.13□□□□□ -1.27
VCAN-207ENST00000507162 CLEC1AQ8NC01 280 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 KIAA0895Q8NCT3 520 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 FNIP1Q8TF40 1166 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 TMEM174Q8WUU8 243 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 EXOC2Q96KP1 924 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 C1orf74Q96LT6 269 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 MAGEB10Q96LZ2 347 aaPredicted RBP7.13□□□□□ -1.27
VCAN-207ENST00000507162 SLC2A13Q96QE2 648 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 FOXC2Q99958 501 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 SPOCK3Q9BQ16 436 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 TEX101Q9BY14 249 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 ZYG11BQ9C0D3 744 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 EPB41L1Q9H4G0 881 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 DLL4Q9NR61 685 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms