RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 GOLGA6BA6NDN3 693 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 RCCD1A6NED2 376 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 FADS2P1A8MWK0 482 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 CDRT15L2A8MXV6 281 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 B4DGG1 531 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 NUDT21O43809 227 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 CST8O60676 142 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 RPLP0P05388 317 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 GOLGA6DP0CG33 693 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 TNNT1P13805 278 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 PECAM1P16284 738 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 PTPN3P26045 913 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 AK4P27144 223 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 CCKBRP32239 447 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 CD68P34810 354 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 CYLC1P35663 651 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 ADCY8P40145 1251 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 GNPDA1P46926 289 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 MARCKSL1P49006 195 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 DYNLT1P63172 113 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 CTBSQ01459 385 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 TLE3Q04726 772 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 WASHC5Q12768 1159 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 ILF3Q12906 894 aaKnown RBP eCLIP9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 TFDP2Q14188 446 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 NR1D2Q14995 579 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 PYCR3Q53H96 274 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 C3orf38Q5JPI3 329 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 B4GALNT4Q76KP1 1039 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 SPRED1Q7Z699 444 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 B3GNT8Q7Z7M8 397 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 CLEC14AQ86T13 490 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 TRIM74Q86UV6 250 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 NT5DC3Q86UY8 548 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 CCNJLQ8IV13 435 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 WDR36Q8NI36 951 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 KIAA1524Q8TCG1 905 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 TEKT5Q96M29 485 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 SLC46A1Q96NT5 459 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 AGAP3Q96P47 875 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 OR2M4Q96R27 311 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 GFM1Q96RP9 751 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 ANP32EQ9BTT0 268 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 ADGRE3Q9BY15 652 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 LRRN3Q9H3W5 708 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 DPEP2Q9H4A9 486 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 GLOD4Q9HC38 313 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 PLSCR2Q9NRY7 297 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 GOLGA6AQ9NYA3 693 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 VPS18Q9P253 973 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 NFKBIL1Q9UBC1 381 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 SAE1Q9UBE0 346 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 MOSPD1Q9UJG1 213 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 TMEM98Q9Y2Y6 226 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 EPN1Q9Y6I3 576 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 RNF215Q9Y6U7 377 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 ZFC3H1O60293 1989 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 AHCTF1Q8WYP5 2266 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 SOWAHDA6NJG2 315 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 BTNL10A8MVZ5 291 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 RRP8O43159 456 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 DNAJC6O75061 913 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 ZRANB2O95218 330 aaKnown RBP eCLIP9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 NDUFA10O95299 355 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 MT-CYBP00156 380 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 MAZP56270 477 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 PCBP4P57723 403 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 DCDC1P59894 354 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 B4GALNT1Q00973 533 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 CDK18Q07002 472 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 ZFP36L1Q07352 338 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 LRP8Q14114 963 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 GALNT3Q14435 633 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 SPA17Q15506 151 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 PPP2R5EQ16537 467 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 ODF2Q5BJF6 829 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 TFDP3Q5H9I0 405 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 DOK6Q6PKX4 331 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 LRRC69Q6ZNQ3 347 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 BBS12Q6ZW61 710 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 BZW1Q7L1Q6 419 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 LYSMD3Q7Z3D4 306 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 TMPRSS9Q7Z410 1059 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 TMC3Q7Z5M5 1100 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 GAS2L3Q86XJ1 694 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 TMTC1Q8IUR5 882 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 SPACA3Q8IXA5 215 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 RCOR2Q8IZ40 523 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 NAGSQ8N159 534 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 ARL14Q8N4G2 192 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 ZNF248Q8NDW4 579 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 NBEAQ8NFP9 2946 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 SPATA22Q8NHS9 363 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 ZDHHC1Q8WTX9 485 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 TFB1MQ8WVM0 346 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 PATE1Q8WXA2 126 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 KRT35Q92764 455 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 CDH19Q9H159 772 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 FAM83DQ9H4H8 585 aa9.01□□□□□ -0.97
PDLIM5-209ENST00000506632 PRORYQ9H606 182 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms