RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 PHTF1Q9UMS5 762 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 VPS4AQ9UN37 437 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 TTLL3Q9Y4R7 772 aa15.97■□□□□ 0.15
PDLIM7-213ENST00000505074 IGHV5-10-1A0A0J9YXX1 117 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 SYCE3A1L190 88 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 HTRA2O43464 458 aaPredicted RBP15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 B4GAT1O43505 415 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 DUX1O43812 170 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 HEXIM1O94992 359 aaKnown RBP15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 SERPING1P05155 500 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 CTPS1P17812 591 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 GM2AP17900 193 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 TRIM23P36406 574 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 ETV3P41162 512 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 GNPDA1P46926 289 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 UBASH3AP57075 661 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 FANCCQ00597 558 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 ILF3Q12906 894 aaKnown RBP eCLIP15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 TRA2AQ13595 282 aaKnown RBP eCLIP15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 IQCB1Q15051 598 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 HADHQ16836 314 aaKnown RBP15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 DEFB109BQ30KR1 87 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 FIGNQ5HY92 759 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 DOK6Q6PKX4 331 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 LUZP1Q86V48 1076 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 SFTPA2Q8IWL1 248 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 AGBL5Q8NDL9 886 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 TEKT4Q8WW24 435 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 CCDC74BQ96LY2 380 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 COQ10AQ96MF6 247 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 MGME1Q9BQP7 344 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 NUDT22Q9BRQ3 303 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 KCTD5Q9NXV2 234 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 SLC39A1Q9NY26 324 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 TP53TG5Q9Y2B4 290 aa15.96■□□□□ 0.15
PDLIM7-213ENST00000505074 ITPR2Q14571 2701 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 NPIPB15A6NHN6 443 aaPredicted RBP15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 RHPN2P1A8MT19 583 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 GOLGA6L19H0YKK7 550 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 MYO1FO00160 1098 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 PEX11BO96011 259 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 HOXC4P09017 264 aaPredicted RBP15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 ALDH4A1P30038 563 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 CSTF2P33240 577 aaKnown RBP eCLIP15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 UQCRFS1P47985 274 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 EPHB1P54762 984 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 OR1D5P58170 312 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 MC1RQ01726 317 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 SLC25A11Q02978 314 aaKnown RBP15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 MMRN1Q13201 1228 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 CCDC122Q5T0U0 273 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 ZFYVE27Q5T4F4 411 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 DCAF12Q5T6F0 453 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 HGSNATQ68CP4 663 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 HSD11B1LQ7Z5J1 315 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 NDUFAF2Q8N183 169 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 DTD2Q96FN9 168 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 GSDMCQ9BYG8 508 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 ZMYND15Q9H091 742 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 CBX8Q9HC52 389 aa15.95■□□□□ 0.14
PDLIM7-213ENST00000505074 A0A1W2PQJ5 194 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 EFCAB7A8K855 629 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 MFSD11O43934 449 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 PGLSO95336 258 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 CCNB1P14635 433 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 LHCGRP22888 699 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 OAS2P29728 719 aaKnown RBP15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 GPR1P46091 355 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 PPM1FP49593 454 aaPredicted RBP15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 LIMK2P53671 638 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 MAZP56270 477 aaKnown RBP15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 ZBED6P86452 979 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 CDK3Q00526 305 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 PTPRRQ15256 657 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 RALGPS1Q5JS13 557 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 CAPRIN2Q6IMN6 1127 aaKnown RBP15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 SLC30A9Q6PML9 568 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 Q6ZVL8 140 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 TSPAN33Q86UF1 283 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 NLGN4XQ8N0W4 816 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 EFCAB3Q8N7B9 438 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 NIPA2Q8N8Q9 360 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 NLGN4YQ8NFZ3 816 aaPredicted RBP15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 ZDHHC1Q8WTX9 485 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 POLR1EQ9GZS1 481 aaKnown RBP15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 PRDM8Q9NQV8 689 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 CD84Q9UIB8 345 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 SUFUQ9UMX1 484 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 SRPK3Q9UPE1 567 aa15.94■□□□□ 0.14
PDLIM7-213ENST00000505074 A0A087X0T9 212 aa15.93■□□□□ 0.14
PDLIM7-213ENST00000505074 A0A0U1RQS6 177 aa15.93■□□□□ 0.14
PDLIM7-213ENST00000505074 PSMD11O00231 422 aa15.93■□□□□ 0.14
PDLIM7-213ENST00000505074 MAP3K6O95382 1288 aa15.93■□□□□ 0.14
PDLIM7-213ENST00000505074 CD48P09326 243 aa15.93■□□□□ 0.14
PDLIM7-213ENST00000505074 FAM228BP0C875 321 aa15.93■□□□□ 0.14
PDLIM7-213ENST00000505074 GNLYP22749 145 aa15.93■□□□□ 0.14
PDLIM7-213ENST00000505074 AK4P27144 223 aaPredicted RBP15.93■□□□□ 0.14
PDLIM7-213ENST00000505074 MAP4P27816 1152 aaKnown RBP15.93■□□□□ 0.14
PDLIM7-213ENST00000505074 RAB15P59190 212 aa15.93■□□□□ 0.14
PDLIM7-213ENST00000505074 ALKBH5Q6P6C2 394 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms