RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 CMTM8Q8IZV2 173 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 VPS39Q96JC1 886 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 LRGUKQ96M69 825 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 SMIM14Q96QK8 99 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 HTATIP2Q9BUP3 242 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 PRKD2Q9BZL6 878 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 THEGQ9P2T0 379 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 APPL1Q9UKG1 709 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 K7ERQ8 282 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 DCXO43602 365 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 AHSGP02765 367 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 SAT1P21673 171 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 EPHA5P54756 1037 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 GPM6BQ13491 265 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 GRM3Q14832 879 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 SHHQ15465 462 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 KIAA0930Q6ICG6 404 aaPredicted RBP13.2□□□□□ -0.3
CCSER1-205ENST00000505073 ZNF783Q6ZMS7 281 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 ATG14Q6ZNE5 492 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 GRASPQ7Z6J2 395 aaPredicted RBP13.2□□□□□ -0.3
CCSER1-205ENST00000505073 ADGRD2Q7Z7M1 963 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 C10orf107Q8IVU9 208 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 OR13J1Q8NGT2 312 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 PPP1R14BQ96C90 147 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 TRIB3Q96RU7 358 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 RANBP9Q96S59 729 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 MCMBPQ9BTE3 642 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 MRPL1Q9BYD6 325 aaKnown RBP13.2□□□□□ -0.3
CCSER1-205ENST00000505073 PCDHGC4Q9Y5F7 938 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 GBF1Q92538 1859 aa13.2□□□□□ -0.3
CCSER1-205ENST00000505073 RB1P06400 928 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 FAM58BPP0C7Q3 252 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 PAMP19021 973 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 HLA-DPA1P20036 260 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 SLC1A2P43004 574 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 SERPINB8P50452 374 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 ARSDP51689 593 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 EMP3P54852 163 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 CSE1LP55060 971 aaKnown RBP13.19□□□□□ -0.3
CCSER1-205ENST00000505073 ABCE1P61221 599 aaKnown RBP13.19□□□□□ -0.3
CCSER1-205ENST00000505073 CREB5Q02930 508 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 KLF10Q13118 480 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 MPPE1Q53F39 396 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 ZNF470Q6ECI4 717 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 ZFP1Q6P2D0 407 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 ZC3HC1Q86WB0 502 aaKnown RBP13.19□□□□□ -0.3
CCSER1-205ENST00000505073 TICAM1Q8IUC6 712 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 CPXM2Q8N436 756 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 ING5Q8WYH8 240 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 USP13Q92995 863 aaPredicted RBP13.19□□□□□ -0.3
CCSER1-205ENST00000505073 PRPF18Q99633 342 aaKnown RBP13.19□□□□□ -0.3
CCSER1-205ENST00000505073 ZNF358Q9NW07 568 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 RIMS3Q9UJD0 308 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 PRPF19Q9UMS4 504 aaKnown RBP13.19□□□□□ -0.3
CCSER1-205ENST00000505073 HCFC2Q9Y5Z7 792 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 ARL5AQ9Y689 179 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 LDB2O43679 373 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 ZBTB14O43829 449 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 PRAMEF12O95522 483 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 NDST3O95803 873 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 FGF1P05230 155 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 PCSK6P29122 969 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 TPP2P29144 1249 aaPredicted RBP13.19□□□□□ -0.3
CCSER1-205ENST00000505073 SLC5A2P31639 672 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 ARRB2P32121 409 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 CD70P32970 193 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 PBX2P40425 430 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 HSPA13P48723 471 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 NR1H2P55055 460 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 LMAN2Q12907 356 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 ATXN7L2Q5T6C5 722 aaPredicted RBP13.19□□□□□ -0.3
CCSER1-205ENST00000505073 ADCY4Q8NFM4 1077 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 SERPINI1Q99574 410 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 TASP1Q9H6P5 420 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 LHX3Q9UBR4 397 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 DCDC2Q9UHG0 476 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 SLC39A10Q9ULF5 831 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 PADI4Q9UM07 663 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 YBX2Q9Y2T7 364 aaKnown RBP13.19□□□□□ -0.3
CCSER1-205ENST00000505073 MYO9BQ13459 2157 aa13.19□□□□□ -0.3
CCSER1-205ENST00000505073 MROH6A6NGR9 719 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 OR51F1A6NGY5 319 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 AURKAO14965 403 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 TIMM44O43615 452 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 COQ9O75208 318 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 GALK1P51570 392 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 SFSWAPQ12872 951 aaKnown RBP13.18□□□□□ -0.3
CCSER1-205ENST00000505073 GK3PQ14409 553 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 ADRM1Q16186 407 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 ARHGAP15Q53QZ3 475 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 NEPROQ6NW34 567 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 PTAR1Q7Z6K3 402 aaPredicted RBP13.18□□□□□ -0.3
CCSER1-205ENST00000505073 CNTN4Q8IWV2 1026 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 DCAF4L2Q8NA75 395 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 CEP70Q8NHQ1 597 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 HDAC10Q969S8 669 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 GFM2Q969S9 779 aaKnown RBP13.18□□□□□ -0.3
CCSER1-205ENST00000505073 RMDN1Q96DB5 314 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 ZSWIM3Q96MP5 696 aa13.18□□□□□ -0.3
CCSER1-205ENST00000505073 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms