RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 SLC26A11Q86WA9 606 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 CXorf40AQ8TE69 158 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 GPR34Q9UPC5 381 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 PCYT1BQ9Y5K3 369 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 TM4SF5O14894 197 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 AVILO75366 819 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 ELFN1P0C7U0 828 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 MGAT1P26572 445 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 NMBRP28336 390 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 ATP5DP30049 168 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 NHLH1Q02575 133 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 SRSF5Q13243 272 aaKnown RBP8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 SIM2Q14190 667 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 CRYMQ14894 314 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 KHDC1Q4VXA5 237 aaKnown RBP8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 AGAP9Q5VTM2 703 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 AFTPHQ6ULP2 937 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 KIAA1324Q6UXG2 1013 aaKnown RBP8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 GLT6D1Q7Z4J2 308 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 TTC7BQ86TV6 843 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 NRROSQ86YC3 692 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 ZNF547Q8IVP9 402 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 CNPY4Q8N129 248 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 HNRNPLLQ8WVV9 542 aaKnown RBP8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 BIRC8Q96P09 236 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 TCF12Q99081 682 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 FSD1LQ9BXM9 530 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 TSPYL1Q9H0U9 437 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 KCTD3Q9Y597 815 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 ST14Q9Y5Y6 855 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 OAS3Q9Y6K5 1087 aaKnown RBP8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 CSNK1G3Q9Y6M4 447 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 PRR23AA6NEV1 266 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 VEGFDO43915 354 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 SRP72O76094 671 aaKnown RBP8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 AP2A2O94973 939 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 CTPS1P17812 591 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 NUMBP49757 651 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 CACNG1Q06432 222 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 WASH2PQ6VEQ5 465 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 UNC5AQ6ZN44 842 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 MARK2Q7KZI7 788 aaKnown RBP8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 ZNF438Q7Z4V0 828 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 GPBAR1Q8TDU6 330 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 MZB1Q8WU39 189 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 APOOQ9BUR5 198 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 GPR174Q9BXC1 333 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 WASH6PQ9NQA3 447 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 INTS10Q9NVR2 710 aaKnown RBP8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 SLC2A6Q9UGQ3 507 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 SMG5Q9UPR3 1016 aaKnown RBP8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 LY6G6EA0A0G2JKS1 128 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 C1orf232A0A0U1RR37 186 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 KCNJ13O60928 360 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 NME1P15531 152 aaKnown RBP8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 PTGER3P43115 390 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 LRRC14Q15048 493 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 KIAA0408Q6ZU52 694 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 PIP4P1Q86T03 277 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 TMEM109Q9BVC6 243 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 DYRK4Q9NR20 520 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 APPL1Q9UKG1 709 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 CORO1CQ9ULV4 474 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 U3KQA8 63 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 A0A1B0GTW7 788 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 USP12O75317 370 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 SPAG6O75602 509 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 CSF2P04141 144 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 SARNPP82979 210 aaKnown RBP8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 FASTKD3Q14CZ7 662 aaKnown RBP8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 CSRP2Q16527 193 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 DUOXA1Q1HG43 343 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 WDR45BQ5MNZ6 344 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 TEDDM1Q5T9Z0 273 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 LYSMD4Q5XG99 296 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 OGFOD3Q6PK18 319 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 CEP128Q6ZU80 1094 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 CILP2Q8IUL8 1156 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 OR13C4Q8NGS5 318 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 OR14C36Q8NHC7 312 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 HEXDCQ8WVB3 486 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 LPGAT1Q92604 370 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 DNAJC1Q96KC8 554 aaKnown RBP8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 C1QTNF7Q9BXJ2 289 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 CHRAC1Q9NRG0 131 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 SMYD2Q9NRG4 433 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 ANAPC5Q9UJX4 755 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 NFS1Q9Y697 457 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 PCDHGA12O60330 932 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 DFNA5O60443 496 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 GABRB3P28472 473 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 ADCY8P40145 1251 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 CARSP49589 748 aaKnown RBP8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 PRLHRP49683 370 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 PPP1R7Q15435 360 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 TRIP13Q15645 432 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 PCSK7Q16549 785 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 HIF1AQ16665 826 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 UBAP2Q5T6F2 1119 aaKnown RBP8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 Q6ZVL8 140 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms