RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 MESDQ14696 234 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 C14orf28Q4W4Y0 310 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 DOK6Q6PKX4 331 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 IGF2-ASQ6U949 168 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 SPRED1Q7Z699 444 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 OR8K1Q8NGG5 319 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 SLC35G2Q8TBE7 412 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 RNF157Q96PX1 679 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 LRRN3Q9H3W5 708 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 UVRAGQ9P2Y5 699 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 PLEKHB1Q9UF11 243 aaPredicted RBP13.09□□□□□ -0.31
DDX41-204ENST00000504807 CNOT6Q9ULM6 557 aaKnown RBP13.09□□□□□ -0.31
DDX41-204ENST00000504807 TFR2Q9UP52 801 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 SLC17A4Q9Y2C5 497 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 PCDHGA8Q9Y5G5 932 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 OAS3Q9Y6K5 1087 aaKnown RBP13.09□□□□□ -0.31
DDX41-204ENST00000504807 ICE1Q9Y2F5 2266 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 TNFSF15O95150 251 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 CLDN7O95471 211 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 H2AFZP0C0S5 128 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 CCNB1P14635 433 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 ITIH1P19827 911 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 CCNCP24863 283 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 MAN1A1P33908 653 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 ADCY8P40145 1251 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 NOP2P46087 812 aaKnown RBP13.08□□□□□ -0.32
DDX41-204ENST00000504807 STC1P52823 247 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 CTBSQ01459 385 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 ADCY2Q08462 1091 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 TBX2Q13207 712 aaPredicted RBP13.08□□□□□ -0.32
DDX41-204ENST00000504807 TBR1Q16650 682 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 HADHQ16836 314 aaKnown RBP13.08□□□□□ -0.32
DDX41-204ENST00000504807 RAET1GQ6H3X3 334 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 H2AFVQ71UI9 128 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 CCNJLQ8IV13 435 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 NAGSQ8N159 534 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 TPCN2Q8NHX9 752 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 GLMNQ92990 594 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 FATE1Q969F0 183 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 IQCDQ96DY2 449 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 SCARF2Q96GP6 870 aaPredicted RBP13.08□□□□□ -0.32
DDX41-204ENST00000504807 POLR1EQ9GZS1 481 aaKnown RBP13.08□□□□□ -0.32
DDX41-204ENST00000504807 SEMA6CQ9H3T2 930 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 GOLPH3Q9H4A6 298 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 DPEP2Q9H4A9 486 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 EPB41L5Q9HCM4 733 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 EVA1BQ9NVM1 165 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 TAAR2Q9P1P5 351 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 LRIT1Q9P2V4 623 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 APPL1Q9UKG1 709 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 PRKAB1Q9Y478 270 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 TTLL3Q9Y4R7 772 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.08□□□□□ -0.322e-6■■■□□ 15
DDX41-204ENST00000504807 SCN8AQ9UQD0 1980 aa13.08□□□□□ -0.32
DDX41-204ENST00000504807 POLQO75417 2590 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 CCDC187A0A096LP49 1063 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 SSU72P8A0A1W2PR75 194 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 GOLGA6CA6NDK9 693 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 GOLGA6BA6NDN3 693 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 FADS2P1A8MWK0 482 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 PSMD11O00231 422 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 ECEL1O95672 775 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 JCHAINP01591 159 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 GOLGA6DP0CG33 693 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 CYP2A6P11509 494 aaPredicted RBP13.07□□□□□ -0.32
DDX41-204ENST00000504807 GLB1P16278 677 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 POU3F2P20265 443 aaPredicted RBP13.07□□□□□ -0.32
DDX41-204ENST00000504807 UGT1A5P35504 534 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 CD86P42081 329 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 OR1D5P58170 312 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 ZFP36L1Q07352 338 aaKnown RBP13.07□□□□□ -0.32
DDX41-204ENST00000504807 DPTQ07507 201 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 PDK2Q15119 407 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 LLGL1Q15334 1064 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 TGIF1Q15583 401 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 IFI16Q16666 785 aaKnown RBP13.07□□□□□ -0.32
DDX41-204ENST00000504807 QPCTQ16769 361 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 RALGPS1Q5JS13 557 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 SLC9A4Q6AI14 798 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 SLC30A9Q6PML9 568 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 USP45Q70EL2 814 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 MARK2Q7KZI7 788 aaKnown RBP13.07□□□□□ -0.32
DDX41-204ENST00000504807 ZNF438Q7Z4V0 828 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 CLEC14AQ86T13 490 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 SLITRK4Q8IW52 837 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 ARL14Q8N4G2 192 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 LPCAT1Q8NF37 534 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 CTNNBL1Q8WYA6 563 aaPredicted RBP13.07□□□□□ -0.32
DDX41-204ENST00000504807 PMEPA1Q969W9 287 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 HDAC11Q96DB2 347 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 COX14Q96I36 57 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 GFM1Q96RP9 751 aaKnown RBP13.07□□□□□ -0.32
DDX41-204ENST00000504807 TRIB3Q96RU7 358 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 NUDT22Q9BRQ3 303 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 RIOK2Q9BVS4 552 aaKnown RBP13.07□□□□□ -0.32
DDX41-204ENST00000504807 NHEJ1Q9H9Q4 299 aaPredicted RBP13.07□□□□□ -0.32
DDX41-204ENST00000504807 RDH14Q9HBH5 336 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 PHPT1Q9NRX4 125 aaPredicted RBP13.07□□□□□ -0.32
DDX41-204ENST00000504807 GOLGA6AQ9NYA3 693 aa13.07□□□□□ -0.32
DDX41-204ENST00000504807 CSMD1Q96PZ7 3565 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms