RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 DNAJC1Q96KC8 554 aaKnown RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 TBATAQ96M53 351 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 HSPA12BQ96MM6 686 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 SLC6A18Q96N87 628 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 VPS35Q96QK1 796 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 SRPK1Q96SB4 655 aaKnown RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 EBNA1BP2Q99848 306 aaKnown RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 FRMD8Q9BZ67 464 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 RAB17Q9H0T7 212 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 CAPN10Q9HC96 672 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 TM9SF3Q9HD45 589 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 BPIFA1Q9NP55 256 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 SMYD2Q9NRG4 433 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 MARCH4Q9P2E8 410 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 RAPGEFL1Q9UHV5 662 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 EIF2B4Q9UI10 523 aaKnown RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 CD84Q9UIB8 345 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 KLF15Q9UIH9 416 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 RAB21Q9UL25 225 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 DMTF1Q9Y222 760 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 NCKAP1Q9Y2A7 1128 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 MED16Q9Y2X0 877 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 HS3ST3A1Q9Y663 406 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 FAM169AQ9Y6X4 670 aa4.92□□□□□ -1.62
LMNB1-208ENST00000504788 COL5A1P20908 1838 aaPredicted RBP4.92□□□□□ -1.62
LMNB1-208ENST00000504788 HEATR9A2RTY3 570 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 CCDC162PA2VCL2 907 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 TMEM202A6NGA9 273 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 OR51F1A6NGY5 319 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 FAM47DPA6NHR8 397 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 SDR42E2A6NKP2 422 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 PATE3B3GLJ2 98 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 CHUKO15111 745 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 DNAJC6O75061 913 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 NEBLO76041 1014 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 PCDH8O95206 1070 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 EPN2O95208 641 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 HNRNPA2B1P22626 353 aaKnown RBP4.91□□□□□ -1.62
LMNB1-208ENST00000504788 HOXD12P35452 270 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 NUDT1P36639 197 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 ELK3P41970 407 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 CSRP3P50461 194 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 TERF1P54274 439 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 PTPN5P54829 565 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 PLTPP55058 493 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 CLDN2P57739 230 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 VSNL1P62760 191 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 RACK1P63244 317 aaKnown RBP4.91□□□□□ -1.62
LMNB1-208ENST00000504788 TIAL1Q01085 375 aaKnown RBP eCLIP4.91□□□□□ -1.623e-15■■■■□ 20.3
LMNB1-208ENST00000504788 CCDC15Q0P6D6 951 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 SFSWAPQ12872 951 aaKnown RBP4.91□□□□□ -1.62
LMNB1-208ENST00000504788 NFATC2Q13469 925 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 FRG1Q14331 258 aaKnown RBP4.91□□□□□ -1.62
LMNB1-208ENST00000504788 INPP5AQ14642 412 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 TYSND1Q2T9J0 566 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 ANKRD20A4Q4UJ75 823 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 DENND2CQ68D51 928 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 KIAA0930Q6ICG6 404 aaPredicted RBP4.91□□□□□ -1.62
LMNB1-208ENST00000504788 ERAP2Q6P179 960 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 SLC23A3Q6PIS1 610 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 CES3Q6UWW8 571 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 ADAMTSL4Q6UY14 1074 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 KYAT3Q6YP21 454 aaKnown RBP4.91□□□□□ -1.62
LMNB1-208ENST00000504788 UNC5AQ6ZN44 842 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 CYS1Q717R9 158 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 CENPUQ71F23 418 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 GLT6D1Q7Z4J2 308 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 C11orf74Q86VG3 221 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 IQCHQ86VS3 1027 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 ZNF547Q8IVP9 402 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 CNTN4Q8IWV2 1026 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 NRSN1Q8IZ57 195 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 OR13H1Q8NG92 308 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 STYXQ8WUJ0 223 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 LRRC39Q96DD0 335 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 LOXL4Q96JB6 756 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 PRRX2Q99811 253 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 RIOK2Q9BVS4 552 aaKnown RBP4.91□□□□□ -1.62
LMNB1-208ENST00000504788 LRRC4CQ9HCJ2 640 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 DYRK4Q9NR20 520 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 RXFP3Q9NSD7 469 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 FAM86C1Q9NVL1 165 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 IL1RAPL1Q9NZN1 696 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 FKBPLQ9UIM3 349 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 ANAPC5Q9UJX4 755 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 NFU1Q9UMS0 254 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 FNDC3AQ9Y2H6 1198 aaKnown RBP4.91□□□□□ -1.62
LMNB1-208ENST00000504788 UTP11Q9Y3A2 253 aaKnown RBP4.91□□□□□ -1.62
LMNB1-208ENST00000504788 OAS3Q9Y6K5 1087 aaKnown RBP4.91□□□□□ -1.62
LMNB1-208ENST00000504788 CEP250Q9BV73 2442 aa4.91□□□□□ -1.62
LMNB1-208ENST00000504788 SPTY2D1-AS1A0A0U1RR47 76 aa4.9□□□□□ -1.62
LMNB1-208ENST00000504788 HMX2A2RU54 273 aa4.9□□□□□ -1.62
LMNB1-208ENST00000504788 GOLGA6CA6NDK9 693 aa4.9□□□□□ -1.62
LMNB1-208ENST00000504788 GOLGA6BA6NDN3 693 aa4.9□□□□□ -1.62
LMNB1-208ENST00000504788 PRR23AA6NEV1 266 aa4.9□□□□□ -1.62
LMNB1-208ENST00000504788 E7EVH7 732 aa4.9□□□□□ -1.62
LMNB1-208ENST00000504788 PRAMEF26H0Y7S4 382 aa4.9□□□□□ -1.62
LMNB1-208ENST00000504788 AP3B1O00203 1094 aa4.9□□□□□ -1.62
LMNB1-208ENST00000504788 VILLO15195 856 aa4.9□□□□□ -1.62
LMNB1-208ENST00000504788 EIF3HO15372 352 aaKnown RBP eCLIP4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms