RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 ACTL9Q8TC94 416 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 HTR3CQ8WXA8 447 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 ALG3Q92685 438 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 NAT6Q93015 286 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 QKIQ96PU8 341 aaKnown RBP eCLIP14.18□□□□□ -0.14
HOXC9-202ENST00000504557 TRIB3Q96RU7 358 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 SPATA16Q9BXB7 569 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 GSDMCQ9BYG8 508 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 OSBPL8Q9BZF1 889 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 FAM83DQ9H4H8 585 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 ZFYVE1Q9HBF4 777 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 RABGEF1Q9UJ41 708 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 RALYQ9UKM9 306 aaKnown RBP14.18□□□□□ -0.14
HOXC9-202ENST00000504557 AMFRQ9UKV5 643 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 ZNF711Q9Y462 761 aa14.18□□□□□ -0.14
HOXC9-202ENST00000504557 BTNL10A8MVZ5 291 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 APOC4-APOC2K7ER74 178 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 PJA2O43164 708 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 MTSS1O43312 755 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 APOC2P02655 101 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 MPOP05164 745 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 PYGMP11217 842 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 CETN2P41208 172 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 CHRNA4P43681 627 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 MAZP56270 477 aaKnown RBP14.17□□□□□ -0.14
HOXC9-202ENST00000504557 WNT3AP56704 352 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 EIF3EP60228 445 aaKnown RBP14.17□□□□□ -0.14
HOXC9-202ENST00000504557 CTBSQ01459 385 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 SPIDRQ14159 915 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 C3orf38Q5JPI3 329 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 ZNF648Q5T619 568 aaPredicted RBP14.17□□□□□ -0.14
HOXC9-202ENST00000504557 DARS2Q6PI48 645 aaKnown RBP14.17□□□□□ -0.14
HOXC9-202ENST00000504557 ADAMTSL4Q6UY14 1074 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 ZNF765Q7L2R6 523 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 NRSN1Q8IZ57 195 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 LRRC57Q8N9N7 239 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 OR2M4Q96R27 311 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 BPIFA1Q9NP55 256 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 SPATS2LQ9NUQ6 558 aaKnown RBP14.17□□□□□ -0.14
HOXC9-202ENST00000504557 TAAR2Q9P1P5 351 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 FAM153AQ9UHL3 310 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 ZNHIT2Q9UHR6 403 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 SPO11Q9Y5K1 396 aa14.17□□□□□ -0.14
HOXC9-202ENST00000504557 OAS3Q9Y6K5 1087 aaKnown RBP14.17□□□□□ -0.14
HOXC9-202ENST00000504557 TRBV23OR9-2A0A075B6M9 112 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 FADS2P1A8MWK0 482 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 HACD1B0YJ81 288 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 AURKAO14965 403 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 BRINP1O60477 761 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 NDST3O95803 873 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 CAPNS1P04632 268 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 RPLP0P05388 317 aaKnown RBP14.16□□□□□ -0.14
HOXC9-202ENST00000504557 ADCY8P40145 1251 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 ACTR1BP42025 376 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 PPM1FP49593 454 aaPredicted RBP14.16□□□□□ -0.14
HOXC9-202ENST00000504557 ACTR1AP61163 376 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 COPS2P61201 443 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 CCL7P80098 99 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 CDCP2Q5VXM1 449 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 RBM44Q6ZP01 1051 aaKnown RBP14.16□□□□□ -0.14
HOXC9-202ENST00000504557 NRROSQ86YC3 692 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 GALNT13Q8IUC8 556 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 TXLNBQ8N3L3 684 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 UBL4BQ8N7F7 174 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 GPR26Q8NDV2 337 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 ZDHHC1Q8WTX9 485 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 HNRNPLLQ8WVV9 542 aaKnown RBP14.16□□□□□ -0.14
HOXC9-202ENST00000504557 PATE1Q8WXA2 126 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 EID2BQ96D98 161 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 ATXN7L3BQ96GX2 97 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 OXNAD1Q96HP4 312 aaPredicted RBP14.16□□□□□ -0.14
HOXC9-202ENST00000504557 CALR3Q96L12 384 aaKnown RBP14.16□□□□□ -0.14
HOXC9-202ENST00000504557 WDR24Q96S15 920 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 LYSMD1Q96S90 227 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 FSD1LQ9BXM9 530 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 CDH19Q9H159 772 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 GUCA1BQ9UMX6 200 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 SLC17A4Q9Y2C5 497 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 CAPN6Q9Y6Q1 641 aa14.16□□□□□ -0.14
HOXC9-202ENST00000504557 ANKRD11Q6UB99 2663 aaPredicted RBP14.16□□□□□ -0.14
HOXC9-202ENST00000504557 DMXL2Q8TDJ6 3036 aa14.15□□□□□ -0.14
HOXC9-202ENST00000504557 KCNN4O15554 427 aa14.15□□□□□ -0.14
HOXC9-202ENST00000504557 BUD23O43709 281 aaKnown RBP14.15□□□□□ -0.14
HOXC9-202ENST00000504557 NOBOXO60393 691 aa14.15□□□□□ -0.14
HOXC9-202ENST00000504557 PYGLP06737 847 aa14.15□□□□□ -0.14
HOXC9-202ENST00000504557 IVLP07476 585 aa14.15□□□□□ -0.14
HOXC9-202ENST00000504557 RBP3P10745 1247 aa14.15□□□□□ -0.14
HOXC9-202ENST00000504557 TEAD1P28347 426 aa14.15□□□□□ -0.14
HOXC9-202ENST00000504557 GABREP78334 506 aa14.15□□□□□ -0.14
HOXC9-202ENST00000504557 ISXQ2M1V0 245 aa14.15□□□□□ -0.14
HOXC9-202ENST00000504557 PLA2G4EQ3MJ16 856 aa14.15□□□□□ -0.14
HOXC9-202ENST00000504557 C14orf28Q4W4Y0 310 aa14.15□□□□□ -0.14
HOXC9-202ENST00000504557 SIRPB2Q5JXA9 342 aa14.15□□□□□ -0.14
HOXC9-202ENST00000504557 HENMT1Q5T8I9 393 aaKnown RBP14.15□□□□□ -0.14
HOXC9-202ENST00000504557 CHST15Q7LFX5 561 aaPredicted RBP14.15□□□□□ -0.14
HOXC9-202ENST00000504557 CDKL3Q8IVW4 592 aaPredicted RBP14.15□□□□□ -0.14
HOXC9-202ENST00000504557 SYCE1Q8N0S2 351 aa14.15□□□□□ -0.14
HOXC9-202ENST00000504557 GPR156Q8NFN8 814 aa14.15□□□□□ -0.14
HOXC9-202ENST00000504557 BLOC1S5Q8TDH9 187 aa14.15□□□□□ -0.14
HOXC9-202ENST00000504557 GPBAR1Q8TDU6 330 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms