RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ABI3BPQ7Z7G0 1075 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 TRIM74Q86UV6 250 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 ANKMY2Q8IV38 441 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 IGDCC3Q8IVU1 814 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 BBOF1Q8ND07 529 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 DENND6BQ8NEG7 585 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 STYXQ8WUJ0 223 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 IFT81Q8WYA0 676 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 ART4Q93070 314 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 KLHDC7BQ96G42 594 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 TBATAQ96M53 351 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 RANBP9Q96S59 729 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 APOOQ9BUR5 198 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 IL22Q9GZX6 179 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 NLE1Q9NVX2 485 aaPredicted RBP13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 NCDNQ9UBB6 729 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 GMEB2Q9UKD1 530 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 TMPRSS11EQ9UL52 423 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 MAD1L1Q9Y6D9 718 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 ZNF292O60281 2723 aa13.2□□□□□ -0.3
PDLIM7-212ENST00000504380 MED19A0JLT2 244 aaPredicted RBP13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 CCDC162PA2VCL2 907 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 RGSL1A5PLK6 1076 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 A6NNZ2 444 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 AP3B1O00203 1094 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 SCAMP1O15126 338 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 SLU7O95391 586 aaKnown RBP13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 THEGLP0DJG4 465 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 CARSP49589 748 aaKnown RBP13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 CDKN1CP49918 316 aaPredicted RBP13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 ARL4CP56559 192 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 PFN3P60673 137 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 IRX4P78413 519 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 XIAPP98170 497 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 DPTQ07507 201 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 PEX6Q13608 980 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 FASTKD3Q14CZ7 662 aaKnown RBP13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 SF3A2Q15428 464 aaKnown RBP13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 DUOXA1Q1HG43 343 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 ZNF542PQ5EBM4 170 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 TRIM61Q5EBN2 209 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 PEAR1Q5VY43 1037 aaPredicted RBP13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 KCTD16Q68DU8 428 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 KYAT3Q6YP21 454 aaKnown RBP13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 HEATR4Q86WZ0 1026 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 SPATS2Q86XZ4 545 aaKnown RBP13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 SLC22A18ASQ8N1D0 253 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 MFSD2AQ8NA29 543 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 OR13J1Q8NGT2 312 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 OR2I1PQ8NGU4 316 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 FBXO25Q8TCJ0 367 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 HDAC10Q969S8 669 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 MFSD3Q96ES6 412 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 CDKN2AIPNLQ96HQ2 116 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 FCRL3Q96P31 734 aaPredicted RBP13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 WDR83Q9BRX9 315 aaKnown RBP13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 PARD6AQ9NPB6 346 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 IL1RAPL1Q9NZN1 696 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 CNOT6Q9ULM6 557 aaKnown RBP13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 SOX13Q9UN79 622 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 ANKRD6Q9Y2G4 727 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 TMEM98Q9Y2Y6 226 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 SNX11Q9Y5W9 270 aa13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 V9GYY5 206 aaPredicted RBP13.19□□□□□ -0.3
PDLIM7-212ENST00000504380 RALGAPA1Q6GYQ0 2036 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 EP300Q09472 2414 aaPredicted RBP13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 GLYATL1P3A0A0U1RQE8 302 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 TLR4O00206 839 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 VILLO15195 856 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 MC4RP32245 332 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 ELK3P41970 407 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 POLD2P49005 469 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 AFF3P51826 1226 aaKnown RBP13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 DRG2P55039 364 aaKnown RBP13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 C21orf59P57076 290 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 DCDC1P59894 354 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 PDE1BQ01064 536 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 PDIA2Q13087 525 aaKnown RBP13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 PDE1CQ14123 709 aaPredicted RBP13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 TEAD4Q15561 434 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 HIF1AQ16665 826 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 SKIDA1Q1XH10 827 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 KIF19Q2TAC6 998 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 ATP13A5Q4VNC0 1218 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 DNAJC21Q5F1R6 531 aaKnown RBP13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 PLA2G2CQ5R387 149 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 DOK6Q6PKX4 331 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 CCDC25Q86WR0 208 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 TRAM1L1Q8N609 369 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 NAT14Q8WUY8 206 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 PTCD2Q8WV60 388 aaKnown RBP13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 SEC14L1Q92503 715 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 ZNF669Q96BR6 464 aaPredicted RBP13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 STAMBPL1Q96FJ0 436 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 CFAP36Q96G28 342 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 KIFC1Q9BW19 673 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 RAD18Q9NS91 495 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 ZDHHC18Q9NUE0 388 aa13.18□□□□□ -0.3
PDLIM7-212ENST00000504380 SAMD15Q9P1V8 674 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms