RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 COQ7Q99807 217 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 GON7Q9BXV9 100 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 MRPL4Q9BYD3 311 aaKnown RBP3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 FRMD8P1Q9BZ68 369 aaPredicted RBP3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 DCLK3Q9C098 648 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 MKRN2Q9H000 416 aaKnown RBP3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 MYLK2Q9H1R3 596 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 KCNH6Q9H252 994 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 PPCSQ9HAB8 311 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 IARS2Q9NSE4 1012 aaKnown RBP3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 OR6C2Q9NZP2 312 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 TMEM216Q9P0N5 145 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 FBXO40Q9UH90 709 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 PPM1HQ9ULR3 514 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 CLEC4AQ9UMR7 237 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 PIN4Q9Y237 131 aaKnown RBP3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 MTO1Q9Y2Z2 717 aaKnown RBP3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 LOC285556D6RIA3 1793 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ARHGEF37A1IGU5 675 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ILVBLA1L0T0 632 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 FAM86B1E9PN63 330 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 KCNK1O00180 336 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 FCHO1O14526 889 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 DCXO43602 365 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 NUAK1O60285 661 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 MAGEC1O60732 1142 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 BANF1O75531 89 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 MYO1DO94832 1006 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 IL18RAPO95256 599 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ITGBL1O95965 494 aaPredicted RBP3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ALBP02768 609 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 PROCP04070 461 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 CHRM5P08912 532 aaPredicted RBP3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ARP10275 920 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 BMP2P12643 396 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ETS1P14921 441 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 TTKP33981 857 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 LEPRP48357 1165 aaKnown RBP3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 HSPA13P48723 471 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 JAK3P52333 1124 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 SLC16A1P53985 500 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 LSM3P62310 102 aaKnown RBP3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 DSG1Q02413 1049 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 TWF1Q12792 350 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 MADCAM1Q13477 382 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ODF1Q14990 250 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 SURF1Q15526 300 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 CARTPTQ16568 116 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 DGKDQ16760 1214 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ARSHQ5FYA8 562 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 TEDDM1Q5T9Z0 273 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 VSTM1Q6UX27 236 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 MAMDC4Q6UXC1 1216 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ZBTB49Q6ZSB9 765 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 NUP54Q7Z3B4 507 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 KCNK18Q7Z418 384 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 CCDC28AQ8IWP9 274 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 CADM2Q8N3J6 435 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 FAM109AQ8N4B1 249 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 BMPERQ8N8U9 685 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ATAD1Q8NBU5 361 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 KIAA0895Q8NCT3 520 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 OR10J5Q8NHC4 309 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 PXYLP1Q8TE99 480 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 SCFD1Q8WVM8 642 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 FUBP3Q96I24 572 aaKnown RBP eCLIP3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 DEPDC7Q96QD5 511 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 DNAJC7Q99615 494 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 TUBA1CQ9BQE3 449 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 SOX7Q9BT81 388 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF700Q9H0M5 742 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 IKZF4Q9H2S9 585 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 NANOGQ9H9S0 305 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 CHST7Q9NS84 486 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 CACNA2D2Q9NY47 1150 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 EIF2B4Q9UI10 523 aaKnown RBP3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 RNF11Q9Y3C5 154 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 TEX51A0A1B0GUA7 166 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 SERTM1A2A2V5 107 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ERI2A8K979 691 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 SUPT3HB4E1H0 165 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 F8W036 122 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 LDLRAD4O15165 306 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 GPR37O15354 613 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 NUPL2O15504 423 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 GATCO43716 136 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 DNAJA2O60884 412 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 H2AFYO75367 372 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PSMG1O95456 288 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 TXNP10599 105 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 SPNP16150 400 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 PSMC3P17980 439 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ATP6V1B2P21281 511 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 ACO1P21399 889 aaKnown RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 TGM2P21980 687 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 GRK2P25098 689 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 RPA1P27694 616 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 SPRP35270 261 aaPredicted RBP3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 WNT5AP41221 380 aa3.66□□□□□ -1.82
PCDH11X-208ENST00000504220 RAP1GAPP47736 663 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms