RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 ERP44Q9BS26 406 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 LRRC1Q9BTT6 524 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 C1QTNF2Q9BXJ5 285 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 DPH5Q9H2P9 285 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 FZD3Q9NPG1 666 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.01□□□□□ -0.81
NUP54-203ENST00000504173 PKD2L2Q9NZM6 624 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 EIF2B4Q9UI10 523 aaKnown RBP10.01□□□□□ -0.81
NUP54-203ENST00000504173 DMTF1Q9Y222 760 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 SNX24Q9Y343 169 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 CEP192Q8TEP8 1941 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 ATXN2Q99700 1313 aaKnown RBP10.01□□□□□ -0.81
NUP54-203ENST00000504173 C2orf81A6NN90 581 aa10□□□□□ -0.81
NUP54-203ENST00000504173 PRAMEF26H0Y7S4 382 aa10□□□□□ -0.81
NUP54-203ENST00000504173 SMAPO00193 183 aa10□□□□□ -0.81
NUP54-203ENST00000504173 AURKAO14965 403 aa10□□□□□ -0.81
NUP54-203ENST00000504173 RAD51BO15315 384 aa10□□□□□ -0.81
NUP54-203ENST00000504173 SEC31AO94979 1220 aaKnown RBP10□□□□□ -0.81
NUP54-203ENST00000504173 WISP1O95388 367 aa10□□□□□ -0.81
NUP54-203ENST00000504173 GM2AP17900 193 aa10□□□□□ -0.81
NUP54-203ENST00000504173 HNRNPA2B1P22626 353 aaKnown RBP10□□□□□ -0.81
NUP54-203ENST00000504173 ITPKAP23677 461 aa10□□□□□ -0.81
NUP54-203ENST00000504173 RPL21P46778 160 aaKnown RBP10□□□□□ -0.81
NUP54-203ENST00000504173 SPINT3P49223 89 aa10□□□□□ -0.81
NUP54-203ENST00000504173 ITGA8P53708 1063 aa10□□□□□ -0.81
NUP54-203ENST00000504173 SLC7A5Q01650 507 aa10□□□□□ -0.81
NUP54-203ENST00000504173 CALCOCO2Q13137 446 aa10□□□□□ -0.81
NUP54-203ENST00000504173 POU6F1Q14863 301 aa10□□□□□ -0.81
NUP54-203ENST00000504173 LRRC14Q15048 493 aa10□□□□□ -0.81
NUP54-203ENST00000504173 IRF4Q15306 451 aa10□□□□□ -0.81
NUP54-203ENST00000504173 TAF1AQ15573 450 aaPredicted RBP10□□□□□ -0.81
NUP54-203ENST00000504173 CERCAMQ5T4B2 595 aa10□□□□□ -0.81
NUP54-203ENST00000504173 LRRC8BQ6P9F7 803 aa10□□□□□ -0.81
NUP54-203ENST00000504173 RFLNAQ6ZTI6 216 aa10□□□□□ -0.81
NUP54-203ENST00000504173 Q6ZVL8 140 aa10□□□□□ -0.81
NUP54-203ENST00000504173 ZNF534Q76KX8 674 aa10□□□□□ -0.81
NUP54-203ENST00000504173 TMC3Q7Z5M5 1100 aa10□□□□□ -0.81
NUP54-203ENST00000504173 TTC30BQ8N4P2 665 aa10□□□□□ -0.81
NUP54-203ENST00000504173 ZCCHC9Q8N567 271 aaKnown RBP10□□□□□ -0.81
NUP54-203ENST00000504173 MCUQ8NE86 351 aa10□□□□□ -0.81
NUP54-203ENST00000504173 DENND6BQ8NEG7 585 aa10□□□□□ -0.81
NUP54-203ENST00000504173 ASB12Q8WXK4 309 aa10□□□□□ -0.81
NUP54-203ENST00000504173 DNASE2BQ8WZ79 361 aa10□□□□□ -0.81
NUP54-203ENST00000504173 PIGKQ92643 395 aa10□□□□□ -0.81
NUP54-203ENST00000504173 DTD2Q96FN9 168 aa10□□□□□ -0.81
NUP54-203ENST00000504173 COQ10AQ96MF6 247 aa10□□□□□ -0.81
NUP54-203ENST00000504173 SLC6A18Q96N87 628 aa10□□□□□ -0.81
NUP54-203ENST00000504173 SERPINB12Q96P63 405 aa10□□□□□ -0.81
NUP54-203ENST00000504173 ORAI3Q9BRQ5 295 aa10□□□□□ -0.81
NUP54-203ENST00000504173 EBF2Q9HAK2 575 aa10□□□□□ -0.81
NUP54-203ENST00000504173 XAB2Q9HCS7 855 aaKnown RBP10□□□□□ -0.81
NUP54-203ENST00000504173 AASDHPPTQ9NRN7 309 aa10□□□□□ -0.81
NUP54-203ENST00000504173 KCTD5Q9NXV2 234 aa10□□□□□ -0.81
NUP54-203ENST00000504173 BFARQ9NZS9 450 aa10□□□□□ -0.81
NUP54-203ENST00000504173 CD84Q9UIB8 345 aa10□□□□□ -0.81
NUP54-203ENST00000504173 ANAPC5Q9UJX4 755 aa10□□□□□ -0.81
NUP54-203ENST00000504173 PKP3Q9Y446 797 aa10□□□□□ -0.81
NUP54-203ENST00000504173 ARL5AQ9Y689 179 aa10□□□□□ -0.81
NUP54-203ENST00000504173 LRRK1Q38SD2 2015 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 HEATR9A2RTY3 570 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 RGSL1A5PLK6 1076 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 FPGTO14772 594 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 BCAT2O15382 392 aaPredicted RBP9.99□□□□□ -0.81
NUP54-203ENST00000504173 STX7O15400 261 aaKnown RBP9.99□□□□□ -0.81
NUP54-203ENST00000504173 BUD23O43709 281 aaKnown RBP9.99□□□□□ -0.81
NUP54-203ENST00000504173 PCCBP05166 539 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 MLNP12872 115 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 GNSP15586 552 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 LPOP22079 712 aaPredicted RBP9.99□□□□□ -0.81
NUP54-203ENST00000504173 MGAT1P26572 445 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 IGFALSP35858 605 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 HMGCLP35914 325 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 DPP6P42658 865 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 NPY2RP49146 381 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 PDE1BQ01064 536 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 MSLNQ13421 630 aaPredicted RBP9.99□□□□□ -0.81
NUP54-203ENST00000504173 MTM1Q13496 603 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 LAMB3Q13751 1172 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 STAT4Q14765 748 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 AGERQ15109 404 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 WSCD2Q2TBF2 565 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 CCDC38Q502W7 563 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 GLE1Q53GS7 698 aaKnown RBP9.99□□□□□ -0.81
NUP54-203ENST00000504173 ALS2CLQ60I27 953 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 DUPD1Q68J44 220 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 HIBCHQ6NVY1 386 aaPredicted RBP9.99□□□□□ -0.81
NUP54-203ENST00000504173 PCSK4Q6UW60 755 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 TECPR1Q7Z6L1 1165 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 CAND1Q86VP6 1230 aaKnown RBP9.99□□□□□ -0.81
NUP54-203ENST00000504173 SYT12Q8IV01 421 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 RAVER1Q8IY67 606 aaKnown RBP9.99□□□□□ -0.81
NUP54-203ENST00000504173 NRSN1Q8IZ57 195 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 CBARPQ8N350 705 aaPredicted RBP9.99□□□□□ -0.81
NUP54-203ENST00000504173 TP53I13Q8NBR0 393 aaPredicted RBP9.99□□□□□ -0.81
NUP54-203ENST00000504173 TMEM145Q8NBT3 493 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 LRRN4CLQ8ND94 238 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 PPHLN1Q8NEY8 458 aaKnown RBP9.99□□□□□ -0.81
NUP54-203ENST00000504173 AP2M1Q96CW1 435 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 EID2BQ96D98 161 aa9.99□□□□□ -0.81
NUP54-203ENST00000504173 LENG8Q96PV6 779 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms