RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 CLCN4P51793 760 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 GTF2A2P52657 109 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 AP1S2P56377 157 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 RPL6Q02878 288 aaKnown RBP6.24□□□□□ -1.41
CLCN3-204ENST00000504131 FNDC3BQ53EP0 1204 aaKnown RBP6.24□□□□□ -1.41
CLCN3-204ENST00000504131 CDC73Q6P1J9 531 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 ARPINQ7Z6K5 226 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 DNAJC10Q8IXB1 793 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 CRYBG2Q8N1P7 616 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 EMC1Q8N766 993 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 ZNF781Q8N8C0 355 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 PIWIL2Q8TC59 973 aaKnown RBP6.24□□□□□ -1.41
CLCN3-204ENST00000504131 C16orf78Q8WTQ4 265 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 CKAP2Q8WWK9 683 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 SGTBQ96EQ0 304 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 ZNF333Q96JL9 665 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 SPATA13Q96N96 652 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 SPON2Q9BUD6 331 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 PHF11Q9UIL8 331 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 POU2F3Q9UKI9 436 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 MAN2B2Q9Y2E5 1009 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 LRRC42Q9Y546 428 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 RTL1A6NKG5 1358 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 MROH7Q68CQ1 1323 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 CYP3A7-CYP3A51PA0A087WV96 503 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 TMEM88BA6NKF7 163 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 C6orf229H3BNL8 230 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 DPYSL4O14531 572 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 CDH16O75309 829 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 UBXN7O94888 489 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 ANGPTL1O95841 491 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 CYP3A7P24462 503 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 PTPN4P29074 926 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 MPIP34949 423 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 SELENOVP59797 346 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 PURAQ00577 322 aaKnown RBP6.24□□□□□ -1.41
CLCN3-204ENST00000504131 LRRC14Q15048 493 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 RPS6KA1Q15418 735 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 DDR2Q16832 855 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 GPR149Q86SP6 731 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 ARHGEF19Q8IW93 802 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 DCUN1D3Q8IWE4 304 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 PDPRQ8NCN5 879 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 KLHL6Q8WZ60 621 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 UTP4Q969X6 686 aaKnown RBP6.24□□□□□ -1.41
CLCN3-204ENST00000504131 POLR1EQ9GZS1 481 aaKnown RBP6.24□□□□□ -1.41
CLCN3-204ENST00000504131 NDST4Q9H3R1 872 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 MTG2Q9H4K7 406 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 NCOA5Q9HCD5 579 aaKnown RBP6.24□□□□□ -1.41
CLCN3-204ENST00000504131 CTPS2Q9NRF8 586 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 TBC1D13Q9NVG8 400 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 PLK2Q9NYY3 685 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.24□□□□□ -1.418e-6■□□□□ 8.7
CLCN3-204ENST00000504131 GLTPQ9NZD2 209 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 ENOPH1Q9UHY7 261 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 MAN1B1Q9UKM7 699 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 CDH7Q9ULB5 785 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 PSMD13Q9UNM6 376 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 ACTL7AQ9Y615 435 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 CEP152O94986 1710 aa6.24□□□□□ -1.41
CLCN3-204ENST00000504131 SYNGAP1Q96PV0 1343 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 PNMA8CA0A1B0GUJ8 204 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 NPIPA5E9PKD4 350 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 NPIPA3F8WFD2 350 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 RBAK-RBAKDNI3L0D1 243 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 PCDH17O14917 1159 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 GPRIN2O60269 458 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 PSAPP07602 524 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 CYP11B1P15538 503 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ZNF25P17030 456 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 EPHB2P29323 1055 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ALDH9A1P49189 494 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 RAB5CP51148 216 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 HIRAP54198 1017 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 MAP4K2Q12851 820 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 BNIP2Q12982 314 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ZNF268Q14587 947 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ARHGAP11BQ3KRB8 267 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 LRRC38Q5VT99 294 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 C6orf89Q6UWU4 347 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 CATSPERGQ6ZRH7 1159 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 DCDC5Q6ZRR9 648 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 TAC4Q86UU9 113 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 PRR18Q8N4B5 295 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ALLCQ8N6M5 410 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 Q8N9G6 341 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 DAGLBQ8NCG7 672 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 CCNYQ8ND76 341 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 C18orf25Q96B23 403 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 SERPINB11Q96P15 392 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 DBNDD2Q9BQY9 259 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ZNF251Q9BRH9 671 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 THTPAQ9BU02 230 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 VCX2Q9H322 139 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 DPEP3Q9H4B8 488 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 NARFLQ9H6Q4 476 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 CHODLQ9H9P2 273 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 RSAD1Q9HA92 442 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 CENPMQ9NSP4 180 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 RBAKQ9NYW8 714 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms