RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 PTGFRNQ9P2B2 879 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 NOCTQ9UK39 431 aaKnown RBP16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 GPR25O00155 361 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 ACSL4O60488 711 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 CCNDBP1O95273 360 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 LAG3P18627 525 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 FLT3LGP49771 235 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 CHADLQ6NUI6 762 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 TEX47Q8TBZ9 253 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 NXNL1Q96CM4 212 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 DNAJC1Q96KC8 554 aaKnown RBP16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 SLC25A51Q9H1U9 297 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 PLGRKTQ9HBL7 147 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 S100A14Q9HCY8 104 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 CORO1CQ9ULV4 474 aaPredicted RBP16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 STXBP5LQ9Y2K9 1186 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 H0Y858 1186 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 CACNB4O00305 520 aaPredicted RBP16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 TM7SF2O76062 418 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 TPP2P29144 1249 aaPredicted RBP16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 CORO1AP31146 461 aaKnown RBP16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 RGL4Q8IZJ4 473 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 MAB21L3Q8N8X9 362 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 FAM13CQ8NE31 585 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 S100ZQ8WXG8 99 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 PLEKHG4BQ96PX9 1271 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 DNAJC11Q9NVH1 559 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 CLIC5Q9NZA1 410 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 ZNF490Q9ULM2 529 aaPredicted RBP16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 PADI3Q9ULW8 664 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 TCAF1Q9Y4C2 921 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 PCDHGA4Q9Y5G9 962 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 AFDNP55196 1824 aaKnown RBP16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 FAM208AQ9UK61 1670 aaKnown RBP16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 DRICH1Q6PGQ1 229 aaPredicted RBP16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 ZBTB2Q8N680 514 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 AARSD1Q9BTE6 412 aaKnown RBP16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 EVA1BQ9NVM1 165 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 DMAC2Q9NW81 257 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 TBC1D14Q9P2M4 693 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 ADGRE2Q9UHX3 823 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 CDK9P50750 372 aaKnown RBP16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 PEX6Q13608 980 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 CBX2Q14781 532 aaPredicted RBP16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 DEFB115Q30KQ5 88 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 ERICH5Q6P6B1 374 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 RBM44Q6ZP01 1051 aaKnown RBP16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 C17orf64Q86WR6 236 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 OR6K2Q8NGY2 324 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 LRTM1Q9HBL6 345 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 NEK6Q9HC98 313 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 RPRD1BQ9NQG5 326 aaKnown RBP16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 TOR4AQ9NXH8 423 aa16.48■□□□□ 0.23
PCDHA1-203ENST00000504120 MATN3O15232 486 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 LRIG2O94898 1065 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 RPL4P36578 427 aaKnown RBP16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 RIPK1Q13546 671 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 CYP4X1Q8N118 509 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 ATAD1Q8NBU5 361 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 SNX27Q96L92 541 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 CRISPLD1Q9H336 500 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 C3orf14Q9HBI5 128 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 SGK2Q9HBY8 427 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 NR2E3Q9Y5X4 410 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 LRRC14BA6NHZ5 514 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 NEDD8-MDP1E9PL57 170 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 TREHO43280 583 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 TRBC1P01850 177 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 SELPP16109 830 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 SPAM1P38567 509 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 POLR2JP52435 117 aaKnown RBP16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 PSMD4P55036 377 aaKnown RBP16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 BNIP1Q12981 228 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 ACAP2Q15057 778 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 ECHDC2Q86YB7 292 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 CLEC4DQ8WXI8 215 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 NUDT4Q9NZJ9 180 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 IGKV6D-41A0A0C4DH26 115 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 SLC28A2O43868 658 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 RCVRNP35243 200 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 CHPFQ8IZ52 775 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 CNTD1Q8N815 330 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 SALL4Q9UJQ4 1053 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 DBTP11182 482 aaKnown RBP16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 KELP23276 732 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 BUD31P41223 144 aaPredicted RBP16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 ZNF567Q8N184 647 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 EEF1AKMT1Q8WVE0 214 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 TWIST2Q8WVJ9 160 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 NDRG1Q92597 394 aaKnown RBP16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 COL20A1Q9P218 1284 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 N6AMT1Q9Y5N5 214 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 C2CD4BA6NLJ0 364 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 ATG13O75143 517 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 SIN3BO75182 1162 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 OR4Q2P0C623 313 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 PRDX6P30041 224 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 MANFP55145 182 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms