RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 ITIH1P19827 911 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 ALDH4A1P30038 563 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 SLC5A2P31639 672 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 ETV5P41161 510 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 IFI35P80217 286 aaPredicted RBP16.16■□□□□ 0.18
SCLT1-204ENST00000503215 TBX2Q13207 712 aaPredicted RBP16.16■□□□□ 0.18
SCLT1-204ENST00000503215 SRSF6Q13247 344 aaKnown RBP16.16■□□□□ 0.18
SCLT1-204ENST00000503215 CLN3Q13286 438 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 GALNT3Q14435 633 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 PYCR3Q53H96 274 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 ZNF574Q6ZN55 896 aaPredicted RBP16.16■□□□□ 0.18
SCLT1-204ENST00000503215 ZNF765Q7L2R6 523 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 SLITRK4Q8IW52 837 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 NDUFAF2Q8N183 169 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 KIAA1524Q8TCG1 905 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 SLC39A7Q92504 469 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 COX14Q96I36 57 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 TMEM74Q96NL1 305 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 GOLPH3Q9H4A6 298 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 SAE1Q9UBE0 346 aaPredicted RBP16.16■□□□□ 0.18
SCLT1-204ENST00000503215 PISDQ9UG56 409 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 TFR2Q9UP52 801 aa16.16■□□□□ 0.18
SCLT1-204ENST00000503215 C1orf232A0A0U1RR37 186 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 ANKRD66B4E2M5 251 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 ATXN7O15265 892 aaPredicted RBP16.15■□□□□ 0.18
SCLT1-204ENST00000503215 EFSO43281 561 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 PIRTP0C851 137 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 KRT10P13645 584 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 COMTP21964 271 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 ACTR1BP42025 376 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 ARHGAP25P42331 645 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 NOP2P46087 812 aaKnown RBP16.15■□□□□ 0.18
SCLT1-204ENST00000503215 SPINT3P49223 89 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 ACTR1AP61163 376 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 RPL26P61254 145 aaKnown RBP16.15■□□□□ 0.18
SCLT1-204ENST00000503215 DYNLT1P63172 113 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 AP1B1Q10567 949 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 TGIF1Q15583 401 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 NKAIN2Q5VXU1 208 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 MFSD7Q6UXD7 560 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 ZNF438Q7Z4V0 828 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 NLRP8Q86W28 1048 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 JAMLQ86YT9 394 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 NRSN1Q8IZ57 195 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 AGAP3Q96P47 875 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 OLFM3Q96PB7 478 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 OR2M4Q96R27 311 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 LYSMD1Q96S90 227 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 NUDT22Q9BRQ3 303 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 DPH1Q9BZG8 443 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 STRADBQ9C0K7 418 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 ARFGAP3Q9NP61 516 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 LCMT1Q9UIC8 334 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 RPL26L1Q9UNX3 145 aaKnown RBP16.15■□□□□ 0.18
SCLT1-204ENST00000503215 LOXL2Q9Y4K0 774 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 ATMQ13315 3056 aa16.15■□□□□ 0.18
SCLT1-204ENST00000503215 RHPN2P1A8MT19 583 aa16.14■□□□□ 0.17
SCLT1-204ENST00000503215 ZNF487B1APH4 448 aa16.14■□□□□ 0.17
SCLT1-204ENST00000503215 APOL1O14791 398 aa16.14■□□□□ 0.17
SCLT1-204ENST00000503215 CD1CP29017 333 aa16.14■□□□□ 0.17
SCLT1-204ENST00000503215 TMPRSS3P57727 454 aa16.14■□□□□ 0.17
SCLT1-204ENST00000503215 CFHR1Q03591 330 aa16.14■□□□□ 0.17
SCLT1-204ENST00000503215 C16orf72Q14CZ0 275 aa16.14■□□□□ 0.17
SCLT1-204ENST00000503215 ZNF648Q5T619 568 aaPredicted RBP16.14■□□□□ 0.17
SCLT1-204ENST00000503215 PHF19Q5T6S3 580 aa16.14■□□□□ 0.17
SCLT1-204ENST00000503215 BROXQ5VW32 411 aa16.14■□□□□ 0.17
SCLT1-204ENST00000503215 LYSMD3Q7Z3D4 306 aa16.14■□□□□ 0.17
SCLT1-204ENST00000503215 ZNF761Q86XN6 746 aaPredicted RBP16.14■□□□□ 0.17
SCLT1-204ENST00000503215 RFX6Q8HWS3 928 aa16.14■□□□□ 0.17
SCLT1-204ENST00000503215 EXD1Q8NHP7 514 aa16.14■□□□□ 0.17
SCLT1-204ENST00000503215 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.14■□□□□ 0.17
SCLT1-204ENST00000503215 TRIB3Q96RU7 358 aa16.14■□□□□ 0.17
SCLT1-204ENST00000503215 MLPHQ9BV36 600 aaPredicted RBP16.14■□□□□ 0.17
SCLT1-204ENST00000503215 MAK16Q9BXY0 300 aaKnown RBP16.14■□□□□ 0.17
SCLT1-204ENST00000503215 SEPT10Q9P0V9 454 aa16.14■□□□□ 0.17
SCLT1-204ENST00000503215 TEX51A0A1B0GUA7 166 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 TMX2-CTNND1H3BSU7 103 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 KALRNO60229 2985 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 DNAJC6O75061 913 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 ASMTLO95671 621 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 TPM1P09493 284 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 ADCY2Q08462 1091 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 HENMT1Q5T8I9 393 aaKnown RBP16.13■□□□□ 0.17
SCLT1-204ENST00000503215 LRRC38Q5VT99 294 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 RHOT2Q8IXI1 618 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 RCBTB1Q8NDN9 531 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 SPATA22Q8NHS9 363 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 TADA1Q96BN2 335 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 IMP4Q96G21 291 aaKnown RBP16.13■□□□□ 0.17
SCLT1-204ENST00000503215 ZNF830Q96NB3 372 aaPredicted RBP16.13■□□□□ 0.17
SCLT1-204ENST00000503215 FAM83DQ9H4H8 585 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 WDR70Q9NW82 654 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 ZNHIT2Q9UHR6 403 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 SHOC2Q9UQ13 582 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 SCN8AQ9UQD0 1980 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 EIF4E1BA6NMX2 242 aaKnown RBP16.13■□□□□ 0.17
SCLT1-204ENST00000503215 AKR1B15C9JRZ8 316 aaPredicted RBP16.13■□□□□ 0.17
SCLT1-204ENST00000503215 CPNE6O95741 557 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 MT-CYBP00156 380 aaPredicted RBP16.13■□□□□ 0.17
SCLT1-204ENST00000503215 JMJD7P0C870 316 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms