RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 INPP5JQ15735 1006 aaPredicted RBP3.69□□□□□ -1.82
CALD1-224ENST00000498254 SNAPC1Q16533 368 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 KRT24Q2M2I5 525 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 RARS2Q5T160 578 aaKnown RBP3.69□□□□□ -1.82
CALD1-224ENST00000498254 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 TRAT1Q6PIZ9 186 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 SUSD1Q6UWL2 747 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 SLC16A12Q6ZSM3 486 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 TAOK1Q7L7X3 1001 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 CHST3Q7LGC8 479 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 IQCHQ86VS3 1027 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 ANKRD13BQ86YJ7 626 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 GALNT16Q8N428 558 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 GUF1Q8N442 669 aaKnown RBP3.69□□□□□ -1.82
CALD1-224ENST00000498254 SPATA6LQ8N4H0 392 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 TC2NQ8N9U0 490 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.69□□□□□ -1.82
CALD1-224ENST00000498254 RBM15BQ8NDT2 890 aaKnown RBP3.69□□□□□ -1.82
CALD1-224ENST00000498254 AGBL3Q8NEM8 1001 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 ENGASEQ8NFI3 743 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 HMGCLL1Q8TB92 370 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 HM13Q8TCT9 377 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 ZFAND2BQ8WV99 257 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 DPF1Q92782 380 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 FNBP1Q96RU3 617 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 RTN4RQ9BZR6 473 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 SLCO5A1Q9H2Y9 848 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 ESRP2Q9H6T0 727 aaKnown RBP3.69□□□□□ -1.82
CALD1-224ENST00000498254 SEBOXQ9HB31 216 aaPredicted RBP3.69□□□□□ -1.82
CALD1-224ENST00000498254 EPB41L5Q9HCM4 733 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 TMEM51Q9NW97 253 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 HAO2Q9NYQ3 351 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 HACL1Q9UJ83 578 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 GTF3C4Q9UKN8 822 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 EXO1Q9UQ84 846 aaKnown RBP3.69□□□□□ -1.82
CALD1-224ENST00000498254 DMRT1Q9Y5R6 373 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 POMT1Q9Y6A1 747 aa3.69□□□□□ -1.82
CALD1-224ENST00000498254 COL11A2P13942 1736 aaPredicted RBP3.68□□□□□ -1.82
CALD1-224ENST00000498254 PPP6CO00743 305 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 TIMM23O14925 209 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 LDB2O43679 373 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 FZD7O75084 574 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 ZC3H11AO75152 810 aaKnown RBP eCLIP3.68□□□□□ -1.82
CALD1-224ENST00000498254 BCAR3O75815 825 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 NDUFB4O95168 129 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 TRUB2O95900 331 aaKnown RBP3.68□□□□□ -1.82
CALD1-224ENST00000498254 PENKP01210 267 aaPredicted RBP3.68□□□□□ -1.82
CALD1-224ENST00000498254 PRKCGP05129 697 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 HSP90AB1P08238 724 aaKnown RBP3.68□□□□□ -1.82
CALD1-224ENST00000498254 IFNAR1P17181 557 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 GJA1P17302 382 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 MYF6P23409 242 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 MCCP23508 829 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 CHATP28329 748 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 COMPP49747 757 aaPredicted RBP3.68□□□□□ -1.82
CALD1-224ENST00000498254 NPY4RP50391 375 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 KRT83P78385 493 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 RBP5P82980 135 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 SREBF2Q12772 1141 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 TFCP2Q12800 502 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 SLC10A2Q12908 348 aaPredicted RBP3.68□□□□□ -1.82
CALD1-224ENST00000498254 FOXF2Q12947 444 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 ZNF284Q2VY69 593 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 CRY2Q49AN0 593 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 FAM98BQ52LJ0 330 aaKnown RBP3.68□□□□□ -1.82
CALD1-224ENST00000498254 SOWAHCQ53LP3 525 aaPredicted RBP3.68□□□□□ -1.82
CALD1-224ENST00000498254 STRIP1Q5VSL9 837 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 GGNBP1Q5YKI7 109 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 TEX38Q6PEX7 206 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 SHFQ7M4L6 423 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 CCDC186Q7Z3E2 898 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 HAUS6Q7Z4H7 955 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 YTHDF3Q7Z739 585 aaKnown RBP3.68□□□□□ -1.82
CALD1-224ENST00000498254 CTU1Q7Z7A3 348 aaKnown RBP3.68□□□□□ -1.82
CALD1-224ENST00000498254 LDB1Q86U70 411 aaPredicted RBP3.68□□□□□ -1.82
CALD1-224ENST00000498254 TSPAN33Q86UF1 283 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 DSELQ8IZU8 1212 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 ZNF713Q8N859 430 aaPredicted RBP3.68□□□□□ -1.82
CALD1-224ENST00000498254 SLC4A11Q8NBS3 891 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 OR1J2Q8NGS2 313 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 CFAP61Q8NHU2 1237 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 RND1Q92730 232 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 NXNL1Q96CM4 212 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 GRAMD2BQ96HH9 432 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 ZNF830Q96NB3 372 aaPredicted RBP3.68□□□□□ -1.82
CALD1-224ENST00000498254 THUMPD3Q9BV44 507 aaKnown RBP3.68□□□□□ -1.82
CALD1-224ENST00000498254 KCNN2Q9H2S1 579 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 R3HDMLQ9H3Y0 253 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 CHCHD3Q9NX63 227 aaKnown RBP3.68□□□□□ -1.82
CALD1-224ENST00000498254 GDE1Q9NZC3 331 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 OR6C3Q9NZP0 311 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 CRNNQ9UBG3 495 aaPredicted RBP3.68□□□□□ -1.82
CALD1-224ENST00000498254 RASAL2Q9UJF2 1139 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 B3GALT5Q9Y2C3 310 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.68□□□□□ -1.82
CALD1-224ENST00000498254 ARHGEF40Q8TER5 1519 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 FLT1P17948 1338 aa3.68□□□□□ -1.82
CALD1-224ENST00000498254 TRAV34A0A0B4J273 112 aa3.67□□□□□ -1.82
CALD1-224ENST00000498254 A0A0B4J293 547 aa3.67□□□□□ -1.82
CALD1-224ENST00000498254 TMEM272A0A1B0GTI8 110 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms