RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ZCCHC9Q8N567 271 aaKnown RBP3.59□□□□□ -1.83
SMC4-227ENST00000497984 TNIP2Q8NFZ5 429 aa3.59□□□□□ -1.83
SMC4-227ENST00000497984 FCAMRQ8WWV6 532 aa3.59□□□□□ -1.83
SMC4-227ENST00000497984 RUFY2Q8WXA3 655 aa3.59□□□□□ -1.83
SMC4-227ENST00000497984 STAMQ92783 540 aa3.59□□□□□ -1.83
SMC4-227ENST00000497984 GCC1Q96CN9 775 aa3.59□□□□□ -1.83
SMC4-227ENST00000497984 METTL2AQ96IZ6 378 aaKnown RBP3.59□□□□□ -1.83
SMC4-227ENST00000497984 CDK19Q9BWU1 502 aa3.59□□□□□ -1.83
SMC4-227ENST00000497984 PLEKHA4Q9H4M7 779 aa3.59□□□□□ -1.83
SMC4-227ENST00000497984 UPF2Q9HAU5 1272 aaKnown RBP3.59□□□□□ -1.83
SMC4-227ENST00000497984 HINT3Q9NQE9 182 aaKnown RBP3.59□□□□□ -1.83
SMC4-227ENST00000497984 BEX4Q9NWD9 120 aaPredicted RBP3.59□□□□□ -1.83
SMC4-227ENST00000497984 PAK5Q9P286 719 aa3.59□□□□□ -1.83
SMC4-227ENST00000497984 A0A087X002 238 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 SYNGR3O43761 229 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 FTCDO95954 541 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 HOXC8P31273 242 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 PSMC2P35998 433 aaKnown RBP3.58□□□□□ -1.84
SMC4-227ENST00000497984 VAMP2P63027 116 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 TLE2Q04725 743 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.58□□□□□ -1.84
SMC4-227ENST00000497984 ATG16L1Q676U5 607 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 ZNF280DQ6N043 979 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 BRAT1Q6PJG6 821 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 ADGRG6Q86SQ4 1221 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 TRPT1Q86TN4 253 aaKnown RBP3.58□□□□□ -1.84
SMC4-227ENST00000497984 LRRTM4Q86VH4 590 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 PCDH20Q8N6Y1 951 aaKnown RBP3.58□□□□□ -1.84
SMC4-227ENST00000497984 OR52I2Q8NH67 350 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 OR5R1Q8NH85 324 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 HUS1BQ8NHY5 278 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 WDR20Q8TBZ3 569 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 HCAR2Q8TDS4 363 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 ELP4Q96EB1 424 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 STAMBPL1Q96FJ0 436 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 NEURL2Q9BR09 285 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 NDST4Q9H3R1 872 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 BPIFA1Q9NP55 256 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 RIC8AQ9NPQ8 531 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 GPR108Q9NPR9 543 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 OGFRQ9NZT2 677 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 TTC7AQ9ULT0 858 aaPredicted RBP3.58□□□□□ -1.84
SMC4-227ENST00000497984 FAM96BQ9Y3D0 163 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 DGKBQ9Y6T7 804 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 PTPRCP08575 1304 aa3.58□□□□□ -1.84
SMC4-227ENST00000497984 IFNL4K9M1U5 179 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 TAF4O00268 1085 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 ZNF821O75541 412 aaPredicted RBP3.57□□□□□ -1.84
SMC4-227ENST00000497984 CD48P09326 243 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 FAM106CPP0CH98 169 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 ZNF26P17031 533 aaPredicted RBP3.57□□□□□ -1.84
SMC4-227ENST00000497984 POU1F1P28069 291 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 CCR5P51681 352 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 EFNB1P98172 346 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 TXNDC8Q6A555 127 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 SPINK14Q6IE38 97 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 OR7E24Q6IFN5 339 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 DUS1LQ6P1R4 473 aaKnown RBP3.57□□□□□ -1.84
SMC4-227ENST00000497984 RAD9BQ6WBX8 426 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 STXBP4Q6ZWJ1 553 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 LRRC8DQ7L1W4 858 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 TDRPQ86YL5 185 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 C11orf65Q8NCR3 313 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 RHBDF1Q96CC6 855 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 ZNF689Q96CS4 500 aaPredicted RBP3.57□□□□□ -1.84
SMC4-227ENST00000497984 LINGO1Q96FE5 620 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 ART5Q96L15 291 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 TKTL2Q9H0I9 626 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 ERVMER34-1Q9H9K5 563 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 PPCSQ9HAB8 311 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 HCN3Q9P1Z3 774 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 HSPB7Q9UBY9 170 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 PADI3Q9ULW8 664 aa3.57□□□□□ -1.84
SMC4-227ENST00000497984 ZCWPW2A0A1B0GU75 182 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 GAGE10A6NGK3 116 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 TEX22C9J3V5 150 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 EIF3FO00303 357 aaPredicted RBP3.56□□□□□ -1.84
SMC4-227ENST00000497984 CTSVO60911 334 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 TFP02787 698 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 URODP06132 367 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 GALTP07902 379 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 RUNX1T1Q06455 604 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 TAF12Q16514 161 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 HIST2H2ACQ16777 129 aaPredicted RBP3.56□□□□□ -1.84
SMC4-227ENST00000497984 ZNF766Q5HY98 468 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 TECRLQ5HYJ1 363 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 GGNBP1Q5YKI7 109 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 CPLX2Q6PUV4 134 aaKnown RBP3.56□□□□□ -1.84
SMC4-227ENST00000497984 CYP26C1Q6V0L0 522 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 CPOQ8IVL8 374 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 TAAR8Q969N4 342 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 ZNF653Q96CK0 615 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 SLC41A2Q96JW4 573 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 NEUROD6Q96NK8 337 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 SCLT1Q96NL6 688 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 QRFPRQ96P65 431 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 FAM110AQ9BQ89 295 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 HEMGNQ9BXL5 484 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 PDZD7Q9H5P4 517 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms