RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 KLHL7Q8IXQ5 586 aa15.92■□□□□ 0.14
CTDSP1-214ENST00000497677 RAVER1Q8IY67 606 aaKnown RBP15.92■□□□□ 0.14
CTDSP1-214ENST00000497677 ZNF567Q8N184 647 aa15.92■□□□□ 0.14
CTDSP1-214ENST00000497677 OR56A4Q8NGH8 313 aa15.92■□□□□ 0.14
CTDSP1-214ENST00000497677 HTR3CQ8WXA8 447 aa15.92■□□□□ 0.14
CTDSP1-214ENST00000497677 SLCO2A1Q92959 643 aa15.92■□□□□ 0.14
CTDSP1-214ENST00000497677 SCAMP4Q969E2 229 aa15.92■□□□□ 0.14
CTDSP1-214ENST00000497677 PDXPQ96GD0 296 aa15.92■□□□□ 0.14
CTDSP1-214ENST00000497677 VAT1Q99536 393 aa15.92■□□□□ 0.14
CTDSP1-214ENST00000497677 ADGRE3Q9BY15 652 aa15.92■□□□□ 0.14
CTDSP1-214ENST00000497677 KLQ9UEF7 1012 aa15.92■□□□□ 0.14
CTDSP1-214ENST00000497677 DNPEPQ9ULA0 475 aa15.92■□□□□ 0.14
CTDSP1-214ENST00000497677 SHROOM3Q8TF72 1996 aa15.92■□□□□ 0.14
CTDSP1-214ENST00000497677 CHD8Q9HCK8 2581 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 CEP295Q9C0D2 2601 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 C1QTNF9BB2RNN3 333 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 C1QTNF9P0C862 333 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 ALPPL2P10696 532 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 CDK4P11802 303 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 MYCLP1P12525 358 aaPredicted RBP15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 NFKB1P19838 968 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 RBL1P28749 1068 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 CDK3Q00526 305 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 OTUD4Q01804 1114 aaKnown RBP15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 GALNT3Q14435 633 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 ZCCHC8Q6NZY4 707 aaKnown RBP15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 KDELC1Q6UW63 502 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 ZNF765Q7L2R6 523 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 PID1Q7Z2X4 250 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 RD3Q7Z3Z2 195 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 HEATR4Q86WZ0 1026 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 NRSN1Q8IZ57 195 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 PRELID2Q8N945 189 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 ATL2Q8NHH9 583 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 OXNAD1Q96HP4 312 aaPredicted RBP15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 FCRL5Q96RD9 977 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 AGAP2Q99490 1192 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 BOCQ9BWV1 1114 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 DDX47Q9H0S4 455 aaKnown RBP15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 MRPL40Q9NQ50 206 aaKnown RBP15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 CD84Q9UIB8 345 aa15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 UTP11Q9Y3A2 253 aaKnown RBP15.91■□□□□ 0.14
CTDSP1-214ENST00000497677 C1orf232A0A0U1RR37 186 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 LOC285095A0A1B0GVY8 99 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 PMPCBO75439 489 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 NDST3O95803 873 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 TNFP01375 233 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 CAPNS1P04632 268 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 CEACAM5P06731 702 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 KELP23276 732 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 COILP38432 576 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 SPINT3P49223 89 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 CLDN6P56747 220 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 DR1Q01658 176 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 CUL1Q13616 776 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 SIX1Q15475 284 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 PCSK7Q16549 785 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 LVRNQ6Q4G3 990 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 ADAMTSL4Q6UY14 1074 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 TMPRSS12Q86WS5 348 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 SDR16C5Q8N3Y7 309 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 FSTL5Q8N475 847 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 PTCD2Q8WV60 388 aaKnown RBP15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 AP2M1Q96CW1 435 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 FAM118BQ9BPY3 351 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 GORASP1Q9BQQ3 440 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 RIOK2Q9BVS4 552 aaKnown RBP15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 FRMD8Q9BZ67 464 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 FAM129AQ9BZQ8 928 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 USP29Q9HBJ7 922 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 MAGEE1Q9HCI5 957 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 ARFGAP3Q9NP61 516 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 PHPT1Q9NRX4 125 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 UBP1Q9NZI7 540 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 KLHL8Q9P2G9 620 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 FAM153AQ9UHL3 310 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 TRHDEQ9UKU6 1024 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 LRRK1Q38SD2 2015 aa15.9■□□□□ 0.14
CTDSP1-214ENST00000497677 FAM149AA5PLN7 773 aa15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 H7C0C1 242 aa15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 RAD51CO43502 376 aa15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 ZNF189O75820 626 aaPredicted RBP15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 EPOP01588 193 aa15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 ANXA6P08133 673 aa15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 PIRTP0C851 137 aa15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 RBP3P10745 1247 aa15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 ATP5OP48047 213 aa15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 DRG2P55039 364 aaKnown RBP15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 WNT3AP56704 352 aa15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 EIF3EP60228 445 aaKnown RBP15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 CAMK2BQ13554 666 aa15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 ELOCQ15369 112 aa15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 C6orf132Q5T0Z8 1188 aa15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 RAET1GQ6H3X3 334 aa15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 CCDC137Q6PK04 289 aaKnown RBP15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 UNQ6494/PRO21346Q6UXR6 183 aa15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 LYSMD3Q7Z3D4 306 aa15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 TMC3Q7Z5M5 1100 aa15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 SLC35F3Q8IY50 421 aa15.89■□□□□ 0.13
CTDSP1-214ENST00000497677 GALNT15Q8N3T1 639 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms