RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 ANKRD6Q9Y2G4 727 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 SBF2Q86WG5 1849 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 H0Y626 953 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 MEN1O00255 615 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 TEX28O15482 410 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 SSX4O60224 188 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 TRIM16O95361 564 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 SNX17Q15036 470 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 LCN8Q6JVE9 175 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 TXNDC11Q6PKC3 985 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 USP51Q70EK9 711 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 TFAP2DQ7Z6R9 452 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 GALNT12Q8IXK2 581 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 AKT1S1Q96B36 256 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 C19orf60Q96EN9 201 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 ATXN3LQ9H3M9 355 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 RPAP3Q9H6T3 665 aaPredicted RBP13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 SLAMF8Q9P0V8 285 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 GMIPQ9P107 970 aa13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 ZFC3H1O60293 1989 aaKnown RBP13.04□□□□□ -0.32
GAPVD1-220ENST00000497580 CENPXA8MT69 81 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 ZBTB24O43167 697 aaPredicted RBP13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 CILPO75339 1184 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 CRCPO75575 148 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 STBD1O95210 358 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 CD4P01730 458 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 VDRP11473 427 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 MTHFRP42898 656 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 EEF1DP3Q658K8 133 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 DCP2Q8IU60 420 aaKnown RBP13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 C1orf127Q8N9H9 656 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 CHDHQ8NE62 594 aaPredicted RBP13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 CNDP2Q96KP4 475 aaKnown RBP13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 BEX2Q9BXY8 128 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 RPF1Q9H9Y2 349 aaKnown RBP13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 TRMT13Q9NUP7 481 aaKnown RBP13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 COQ3Q9NZJ6 369 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 ERVK-18Q9QC07 812 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 PPP6CO00743 305 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 TFECO14948 347 aaPredicted RBP13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 LINC00032P0C843 101 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 IFI30P13284 250 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 DDX5P17844 614 aaKnown RBP13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 PPP5CP53041 499 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 SLC6A3Q01959 620 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 TRIP4Q15650 581 aaPredicted RBP13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 SYT16Q17RD7 645 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 NOL9Q5SY16 702 aaKnown RBP13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 PPP1R26Q5T8A7 1209 aaPredicted RBP13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 GALNT5Q7Z7M9 940 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 PSTKQ8IV42 348 aaKnown RBP13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 MIER2Q8N344 545 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 FAR1Q8WVX9 515 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 ROPN1LQ96C74 230 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 KCNA7Q96RP8 456 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 CPNE5Q9HCH3 593 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 ZNF302Q9NR11 478 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 PDLIM7Q9NR12 457 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 VWA7Q9Y334 891 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 A8MT66 165 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 MDM4O15151 490 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 KMOO15229 486 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 UPK1BO75841 260 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 FTH1P02794 183 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 CD68P34810 354 aaPredicted RBP13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 GNG2P59768 71 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 ENPEPQ07075 957 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 KCNAB2Q13303 367 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 ZNF470Q6ECI4 717 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 LYPD8Q6UX82 237 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 DNERQ8NFT8 737 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 MUL1Q969V5 352 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 OMA1Q96E52 524 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 HOPXQ9BPY8 73 aaPredicted RBP13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 SIX4Q9UIU6 781 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 ADAMTSL1Q8N6G6 1762 aa13.03□□□□□ -0.32
GAPVD1-220ENST00000497580 A0A087WZ62 844 aa13.02□□□□□ -0.32
GAPVD1-220ENST00000497580 FAM172BPA6NC97 362 aa13.02□□□□□ -0.32
GAPVD1-220ENST00000497580 CHRNA1P02708 482 aa13.02□□□□□ -0.32
GAPVD1-220ENST00000497580 HGFP14210 728 aa13.02□□□□□ -0.32
GAPVD1-220ENST00000497580 ARCN1P48444 511 aaKnown RBP13.02□□□□□ -0.32
GAPVD1-220ENST00000497580 ALDH3A2P51648 485 aa13.02□□□□□ -0.32
GAPVD1-220ENST00000497580 STRADAQ7RTN6 431 aa13.02□□□□□ -0.32
GAPVD1-220ENST00000497580 TMEM135Q86UB9 458 aa13.02□□□□□ -0.32
GAPVD1-220ENST00000497580 BPHLQ86WA6 291 aaPredicted RBP13.02□□□□□ -0.32
GAPVD1-220ENST00000497580 TRIB2Q92519 343 aa13.02□□□□□ -0.32
GAPVD1-220ENST00000497580 ALG9Q9H6U8 611 aa13.02□□□□□ -0.32
GAPVD1-220ENST00000497580 ENTPD7Q9NQZ7 604 aa13.02□□□□□ -0.32
GAPVD1-220ENST00000497580 SPEF1Q9Y4P9 236 aa13.02□□□□□ -0.32
GAPVD1-220ENST00000497580 YDJCA8MPS7 323 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 SLC22A1O15245 554 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 NPHS1O60500 1241 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 APOA1P02647 267 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 CCDC159P0C7I6 412 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 NFKB1P19838 968 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 EIF2DP41214 584 aaKnown RBP13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 DAB2P98082 770 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 EMX1Q04741 257 aaPredicted RBP13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 DPYSL2Q16555 572 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms