RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ROR2Q01974 943 aaKnown RBP4.06□□□□□ -1.76
SMC4-225ENST00000497203 GRIK2Q13002 908 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 PRPF4BQ13523 1007 aaKnown RBP4.06□□□□□ -1.76
SMC4-225ENST00000497203 CTTNQ14247 550 aaKnown RBP4.06□□□□□ -1.76
SMC4-225ENST00000497203 FAM133BQ5BKY9 247 aaKnown RBP4.06□□□□□ -1.76
SMC4-225ENST00000497203 RARS2Q5T160 578 aaKnown RBP4.06□□□□□ -1.76
SMC4-225ENST00000497203 GARNL3Q5VVW2 1013 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 CRELD2Q6UXH1 353 aaPredicted RBP4.06□□□□□ -1.76
SMC4-225ENST00000497203 ZNF517Q6ZMY9 492 aaPredicted RBP4.06□□□□□ -1.76
SMC4-225ENST00000497203 TAOK1Q7L7X3 1001 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 DNAAF5Q86Y56 855 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 AADATQ8N5Z0 425 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 POMGNT2Q8NAT1 580 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 HJURPQ8NCD3 748 aaPredicted RBP4.06□□□□□ -1.76
SMC4-225ENST00000497203 OR8K5Q8NH50 307 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 TRPC4APQ8TEL6 797 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 PPP1R13BQ96KQ4 1090 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 SRSF8Q9BRL6 282 aaKnown RBP4.06□□□□□ -1.76
SMC4-225ENST00000497203 TXLNGYQ9BZA5 131 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 SIL1Q9H173 461 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 HRH4Q9H3N8 390 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 ARHGEF38Q9NXL2 777 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 FZD10Q9ULW2 581 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 TTC3P53804 2025 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 ATXN2Q99700 1313 aaKnown RBP4.05□□□□□ -1.76
SMC4-225ENST00000497203 IGHV4-28A0A0C4DH34 117 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 C1orf226A1L170 272 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 ATP2A1O14983 1001 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 HSPA12AO43301 675 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 ZNF500O60304 480 aaPredicted RBP4.05□□□□□ -1.76
SMC4-225ENST00000497203 LCATP04180 440 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 ADRB2P07550 413 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 CYC1P08574 325 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 SELLP14151 372 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 ANXA7P20073 488 aaKnown RBP4.05□□□□□ -1.76
SMC4-225ENST00000497203 ACADLP28330 430 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 HOXD3P31249 432 aaPredicted RBP4.05□□□□□ -1.76
SMC4-225ENST00000497203 STX2P32856 288 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 PIGAP37287 484 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 HSD17B4P51659 736 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 STAT2P52630 851 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 PNLIPRP2P54317 469 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 NANOS2P60321 138 aaKnown RBP4.05□□□□□ -1.76
SMC4-225ENST00000497203 KCNC3Q14003 757 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 PCLAFQ15004 111 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 PNLIPRP3Q17RR3 467 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 BMP2KLQ5H9B9 411 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 FNBP1LQ5T0N5 605 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 LRIF1Q5T3J3 769 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 KRT79Q5XKE5 535 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 HIST2H2BCQ6DN03 193 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 HIST2H2BDQ6DRA6 164 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 ZNF280DQ6N043 979 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 ANKRD54Q6NXT1 300 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 KCTD18Q6PI47 426 aaPredicted RBP4.05□□□□□ -1.76
SMC4-225ENST00000497203 ZDHHC17Q8IUH5 632 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 SCML4Q8N228 414 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 SYT2Q8N9I0 419 aaPredicted RBP4.05□□□□□ -1.76
SMC4-225ENST00000497203 AVL9Q8NBF6 648 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 MCUQ8NE86 351 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 APPL2Q8NEU8 664 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 LRRC59Q96AG4 307 aaKnown RBP4.05□□□□□ -1.76
SMC4-225ENST00000497203 SLC22A18Q96BI1 424 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 URB1-AS1Q96HZ7 61 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 KIFC3Q9BVG8 833 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 RBM38Q9H0Z9 239 aaKnown RBP4.05□□□□□ -1.76
SMC4-225ENST00000497203 PPP1R3EQ9H7J1 279 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.05□□□□□ -1.76
SMC4-225ENST00000497203 ACSS1Q9NUB1 689 aaPredicted RBP4.05□□□□□ -1.76
SMC4-225ENST00000497203 HIF1ANQ9NWT6 349 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 CFDP1Q9UEE9 299 aaPredicted RBP4.05□□□□□ -1.76
SMC4-225ENST00000497203 OR14J1Q9UGF5 321 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 CDC14AQ9UNH5 594 aa4.05□□□□□ -1.76
SMC4-225ENST00000497203 OR6C75A6NL08 312 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 BECN2A8MW95 431 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 TNFRSF13BO14836 293 aaPredicted RBP4.04□□□□□ -1.76
SMC4-225ENST00000497203 SMAD9O15198 467 aaKnown RBP4.04□□□□□ -1.76
SMC4-225ENST00000497203 RGS14O43566 566 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 ZIC3O60481 467 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 DKC1O60832 514 aaKnown RBP eCLIP4.04□□□□□ -1.76
SMC4-225ENST00000497203 AVILO75366 819 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 ARRB2P32121 409 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 AMTP48728 403 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 THBS3P49746 956 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 GPR143P51810 404 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 CSNK2A1P68400 391 aaPredicted RBP4.04□□□□□ -1.76
SMC4-225ENST00000497203 DSC1Q08554 894 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 SREBF2Q12772 1141 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 TRAF1Q13077 416 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 BAATQ14032 418 aaPredicted RBP4.04□□□□□ -1.76
SMC4-225ENST00000497203 RASA2Q15283 850 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 TMEM266Q2M3C6 531 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 ZNF805Q5CZA5 627 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 EFHC1Q5JVL4 640 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 TYW3Q6IPR3 259 aaKnown RBP4.04□□□□□ -1.76
SMC4-225ENST00000497203 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 ZC3HC1Q86WB0 502 aaKnown RBP4.04□□□□□ -1.76
SMC4-225ENST00000497203 IL17RCQ8NAC3 791 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 CCDC191Q8NCU4 936 aa4.04□□□□□ -1.76
SMC4-225ENST00000497203 CSNK2A3Q8NEV1 391 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms