RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 CEP41Q9BYV8 373 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 GOLPH3Q9H4A6 298 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 ASCL3Q9NQ33 180 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 TAAR2Q9P1P5 351 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 SATB2Q9UPW6 733 aa15.64■□□□□ 0.09
HDAC4-213ENST00000496347 KALRNO60229 2985 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 hCG_1818297A0A087WSY0 165 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 CCDC187A0A096LP49 1063 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 SOWAHDA6NJG2 315 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 ZRANB2O95218 330 aaKnown RBP eCLIP15.63■□□□□ 0.09
HDAC4-213ENST00000496347 CLDN7O95471 211 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 PECAM1P16284 738 aaPredicted RBP15.63■□□□□ 0.09
HDAC4-213ENST00000496347 PTPN3P26045 913 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 CCKBRP32239 447 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 ADCY8P40145 1251 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 MARCKSL1P49006 195 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 GALNT3Q14435 633 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 NR1D2Q14995 579 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 TEX44Q53QW1 395 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 DAAM2Q86T65 1068 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 PDZD3Q86UT5 571 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 C17orf82Q86X59 251 aaPredicted RBP15.63■□□□□ 0.09
HDAC4-213ENST00000496347 NRROSQ86YC3 692 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 GALNT13Q8IUC8 556 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 CCDC50Q8IVM0 306 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 RCOR2Q8IZ40 523 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 ZNF248Q8NDW4 579 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 WDR36Q8NI36 951 aaKnown RBP15.63■□□□□ 0.09
HDAC4-213ENST00000496347 ZDHHC1Q8WTX9 485 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 HNRNPLLQ8WVV9 542 aaKnown RBP15.63■□□□□ 0.09
HDAC4-213ENST00000496347 QKIQ96PU8 341 aaKnown RBP eCLIP15.63■□□□□ 0.09
HDAC4-213ENST00000496347 VAT1Q99536 393 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 STRADBQ9C0K7 418 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 RBSNQ9H1K0 784 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 LRRN3Q9H3W5 708 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 SUDS3Q9H7L9 328 aaPredicted RBP15.63■□□□□ 0.09
HDAC4-213ENST00000496347 GLOD4Q9HC38 313 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 RAD18Q9NS91 495 aa15.63■□□□□ 0.09
HDAC4-213ENST00000496347 A0A1W2PQM1 296 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 BTNL10A8MVZ5 291 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 ZW10O43264 779 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 FUCA1P04066 466 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 ITGA2BP08514 1039 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 RBMS1P29558 406 aaKnown RBP15.62■□□□□ 0.09
HDAC4-213ENST00000496347 CTNNA1P35221 906 aaKnown RBP15.62■□□□□ 0.09
HDAC4-213ENST00000496347 COPS2P61201 443 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 CTBSQ01459 385 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 CDK18Q07002 472 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 CLPPQ16740 277 aaPredicted RBP15.62■□□□□ 0.09
HDAC4-213ENST00000496347 PYCR3Q53H96 274 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 KAZNQ674X7 775 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 PDPK2PQ6A1A2 396 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 SLC30A9Q6PML9 568 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 BBS12Q6ZW61 710 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 LYSMD3Q7Z3D4 306 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 TRIM74Q86UV6 250 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 ARL14Q8N4G2 192 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 PTCD2Q8WV60 388 aaKnown RBP15.62■□□□□ 0.09
HDAC4-213ENST00000496347 TEKT5Q96M29 485 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 TMEM74Q96NL1 305 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 FAM83DQ9H4H8 585 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 RMI1Q9H9A7 625 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 ZFYVE1Q9HBF4 777 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 MAGEE1Q9HCI5 957 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 RALYQ9UKM9 306 aaKnown RBP15.62■□□□□ 0.09
HDAC4-213ENST00000496347 ZNF711Q9Y462 761 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 EPN1Q9Y6I3 576 aaPredicted RBP15.62■□□□□ 0.09
HDAC4-213ENST00000496347 RNF215Q9Y6U7 377 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 ATMQ13315 3056 aa15.62■□□□□ 0.09
HDAC4-213ENST00000496347 ZNF106Q9H2Y7 1883 aaKnown RBP15.61■□□□□ 0.09
HDAC4-213ENST00000496347 A0A1W2PNU3 283 aaPredicted RBP15.61■□□□□ 0.09
HDAC4-213ENST00000496347 HACD1B0YJ81 288 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 GPR89AB7ZAQ6 455 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 APOC4-APOC2K7ER74 178 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 NDST3O95803 873 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 APOC2P02655 101 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 GPR89BP0CG08 455 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 ACTR1BP42025 376 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 POLD2P49005 469 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 ACTR1AP61163 376 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 CCL7P80098 99 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 WASHC5Q12768 1159 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 PCSK7Q16549 785 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 ZNF569Q5MCW4 686 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 B3GNT8Q7Z7M8 397 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 KRT35Q92764 455 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 TMEM159Q96B96 161 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 SLC46A1Q96NT5 459 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 AGAP2Q99490 1192 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 ZSCAN5AQ9BUG6 496 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 SPATS2LQ9NUQ6 558 aaKnown RBP15.61■□□□□ 0.09
HDAC4-213ENST00000496347 LRIT1Q9P2V4 623 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 SAE1Q9UBE0 346 aaPredicted RBP15.61■□□□□ 0.09
HDAC4-213ENST00000496347 TFR2Q9UP52 801 aa15.61■□□□□ 0.09
HDAC4-213ENST00000496347 FADS2P1A8MWK0 482 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 CDRT15L2A8MXV6 281 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 CASC3O15234 703 aaKnown RBP15.6■□□□□ 0.09
HDAC4-213ENST00000496347 INPP4BO15327 924 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 MT-CYBP00156 380 aaPredicted RBP15.6■□□□□ 0.09
HDAC4-213ENST00000496347 FGF1P05230 155 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms